Pairwise Alignments

Query, 421 a.a., type VI secretion protein from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., membrane protein from Dickeya dianthicola ME23

 Score = 66.2 bits (160), Expect = 2e-15
 Identities = 53/187 (28%), Positives = 82/187 (43%), Gaps = 9/187 (4%)

Query: 23  RGLEPYAKVREEINRRFNPIAGGTDWAVVKEYCEQLACNQGMDFLICGYYAVACLKTQGL 82
           R L  Y  +R EIN+  +      DW  V +    +   QG+D     Y+ +A  +  GL
Sbjct: 15  RMLPEYEALRAEINKLSHASRPDVDWMRVHDMATAIFEKQGVDLQTAIYFTLARSRLAGL 74

Query: 83  AGYATGMELMSASLANQGE---CDVKSAKVRKEILDWVNARVVQELKALKPTYESLRDLY 139
            G+  G E ++  +  Q E     V   + R EILDW  AR+ + ++    ++E  R +Y
Sbjct: 75  NGFTEGCEFLANLIVTQWENFWPPVHQERARIEILDWFIARISEVIRQYAISHEHKRLVY 134

Query: 140 RAER----HCERLHQ--LFEQQQTEYKVDFEGVGFALFEHIDRIETQYHSLLKKQEKAQP 193
           R ER      E+LH   L    + E  + F      LF+  + +       LKKQ   Q 
Sbjct: 135 RCERALQLMSEKLHNSGLSRIPRVENLLHFIEGYTHLFDETEIVIVSDDQTLKKQHDMQI 194

Query: 194 PKLKFWQ 200
           P + F+Q
Sbjct: 195 PPMVFFQ 201