Pairwise Alignments

Query, 1181 a.a., type VI secretion system membrane subunit TssM from Vibrio cholerae E7946 ATCC 55056

Subject, 1164 a.a., type VI secretion system membrane subunit TssM from Dickeya dianthicola ME23

 Score =  828 bits (2138), Expect = 0.0
 Identities = 458/1184 (38%), Positives = 685/1184 (57%), Gaps = 23/1184 (1%)

Query: 1    MWKFIVGIVRRLKPTVVAALPILLFTTFILLNVAIWWAGPWLEVAGYKPLESIMARVVAS 60
            M K I+  +R+  P +  +  +L    + +  V  WW GP L +   +PL+S+  RVV +
Sbjct: 1    MLKIIITFLRQQLPKLKPSWLLLGVVVWTVALVLAWWLGPRLTLGDMRPLQSVWGRVVFT 60

Query: 61   SLFT-LG-CLAVWGIWQWRKLQAFKSEQKREEQLRQDPIKVYEQRQEVELNQVMLNMKQS 118
             ++  LG   + W +WQ  ++Q +++E++ ++ + QDP++VY   Q+  L++ +   +  
Sbjct: 61   LVWLWLGFAYSAWRVWQ--RVQQWRAERREQQIIEQDPLQVYVDSQQTFLDRWLQAFQAQ 118

Query: 119  LNKHNYLYALPWYLVLGLENAGKTSLINRSGQNFVFSSVMRASGQKSENPYSFDWWIGDE 178
            L K   LYA+PWYL +GL  +GK+SLI+R+      +  + A  ++       + W+G+ 
Sbjct: 119  LGK-KALYAMPWYLAIGLSGSGKSSLIHRANPANKLNPKLDAELREVAGGQQVNSWVGES 177

Query: 179  SVLIDPDGELLTQGNRSEENDGALERRLWLHFVDWLDRTRSRRPLNGIVLALDVAHLATA 238
            +V+ DP G+LL Q     E       RLW H + WL   R R+PLNG+VL +D++ L+ A
Sbjct: 178  AVIWDPSGQLLAQPEVGAEPSAGRHARLWQHLLQWLSLNRRRQPLNGLVLTIDLSWLSQA 237

Query: 239  TASERKAYANLLRARLRELMETLSTRLPVYIALTKLDLLHGFEPFFKHYTKSQREEVLGF 298
            + SERKAYA ++RARL+E+   ++TRLP+Y+ALT+LD+L GF+  ++   +  R+ VLG 
Sbjct: 238  SVSERKAYAQVMRARLQEIAVNINTRLPLYVALTRLDMLRGFDVVYRSLNREARQAVLGV 297

Query: 299  TFSMDSVDNLDSWLEEFASEYTQFVSRVNGMLPHAVAAPMTLEERNAIYSFTRQISGLKE 358
            TF+  +      WLEE    +  +++ +N  LP  +        RN +++F RQ++GLK+
Sbjct: 298  TFTPQASHG-KGWLEELERFWDDWIANLNNNLPEMLLTQSDSGVRNTLFTFVRQLAGLKD 356

Query: 359  ILQQFFQEALASDQFSTSALVRGAYFTSVYQQGVPTNAFDDAASRRYGLSHAINTAQRAK 418
             +     E LA+     + LVRG Y +SVYQQGVP +AF  +ASRRY L   IN A R +
Sbjct: 357  YVTDVLSETLATGD-DRAFLVRGLYVSSVYQQGVPFDAFAQSASRRYQLPEPINAAMRGE 415

Query: 419  NSTVYFTQKLFTHIIYPEAGLASDNFRVAKNKRRLMGLSFVACSVATLLLAGTWHRNYLN 478
            ++T +F QKLF  +I+PEA LA +N   +  +RR M +      +  L + G+WH  Y  
Sbjct: 416  SNT-FFVQKLFPEVIFPEASLAGENRLHSLYRRRRMSIGVTCMVLFGLAMIGSWHHFYRV 474

Query: 479  NVQHADTVLTKVNQYKEQFPTSRSLASQREVLDPLNKIREATLEFGFFRDKPQYISDFGL 538
            N +    VLTK   +              + L  LN IR+ATL FG + ++   ++D GL
Sbjct: 475  NEEAGRNVLTKAQAFIGTNELEGQAGYGYQQLPRLNLIRDATLSFGNYHERTPMMADLGL 534

Query: 539  YQGHTIGPKVEETYLNLLETRFLPLLMADTIVALNQAET-DEEKLAVLRVYRMLVDKSGR 597
            YQG  IGP VE +YL +L  RFLP +M   +  LNQA    E+KL +LRV RML D SGR
Sbjct: 535  YQGDKIGPYVEGSYLQMLNQRFLPAVMQGLLEDLNQAPAGSEQKLTILRVMRMLDDASGR 594

Query: 598  YQDYVMDYFAKYWQKSFSGQRQIQEELLGHLDYAMRHTDLTAERLNGDKGAEQVMRPYDK 657
             +  V  + A  WQK+F GQ ++QE+L+ HLDYA+  TD    R   D  A     P+  
Sbjct: 595  NKTLVEQFMALRWQKAFPGQGKVQEQLMQHLDYALESTDWHQSREQKDTVAIASFAPFVD 654

Query: 658  VIARAQVELGSMPNDQRVYRNLKLSAQTVLGPSVNLRSLIGPVFDVVFEERVLNSSSLFI 717
             IA AQ EL  +P  QRVY++L + A  VL P + +R  +GP FD VF  R  N  +  +
Sbjct: 655  PIANAQRELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDSVFTLR--NDKAGTV 712

Query: 718  PQMLTKRGFDDYFMPQSESVSELALIDSWVLGQSKTAQFSEADKQALREKIRDLYVADYT 777
            P++LT  GF D+++ Q +++ +L  +D+WVLGQ + A  SEAD++ +  ++ D Y+ DY 
Sbjct: 713  PRLLTYPGFSDFYLKQDKALLDLTALDAWVLGQRERAHLSEADRKEILRQVNDRYITDYI 772

Query: 778  NTWRAALNEIDVKYFNDINDAVMVLENITSNLEPMQRLLRTLDDNTQLYSALPKDESALK 837
            N W+ AL  IDV+       A+ +L +IT N +P QR+L T+ DNT++   L  DE+   
Sbjct: 773  NQWQKALANIDVQPLEGPEQALNILTDITGNDQPFQRVLTTVSDNTRIRK-LADDENDTA 831

Query: 838  ELLKSPKYKVASMIETPFADLNGMLKPVGSKPAYMTEVLASVDELKSYLKSIQDAPDVGM 897
            +        + + I  PF  +N  L   G +   + EV   + +L  YL  I +A D G 
Sbjct: 832  Q-------GINTRIGRPFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNATDPGQ 884

Query: 898  AALDATKARVKLVNADPIYTLKRISSGLPKPLDSMMAKLADESWYVVKQEAIKHLEVRWT 957
            AAL A +AR     ADP++ L++ +  LP PLD  + +LA ES  +V   A+  L   WT
Sbjct: 885  AALKAVQARQGNKFADPVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWT 944

Query: 958  EDVYKTFQSKLAGRYPFNPASNKDVALADFEAFFAPNGTLDNFYNQQLKMFIDENISVAS 1017
            + V   F  KLA RYPFNP+S+KDV L++ E FFA  GTLD+FY   LK  +D  +    
Sbjct: 945  DKVVTPFNEKLADRYPFNPSSDKDVPLSEMERFFAVGGTLDSFYQSNLKSIMDSGML--- 1001

Query: 1018 DDSAQSIIRKEVLDQIKQAQKIREAFFNRKGILDVSFSVEPLSLSNNKRRSVLNVDGQFL 1077
             + + S ++ E++ Q+++A ++R+  FN +G L++ F VEP+ L+ NKRRSVLN+DGQ L
Sbjct: 1002 -EESASPLQTELVKQLERATRLRQTLFNAQGSLEIHFVVEPVELTANKRRSVLNLDGQLL 1060

Query: 1078 AYSHGPRENVELIWPNTLRDSAVSKVTLIPTQTNMSPRSLQIQGPWAFFRLLDQGDVVSA 1137
             YSHG R    L+WPN++RD A SK+TL+P     SPRSL   GPWA FRLL  G +   
Sbjct: 1061 EYSHGRRTKTPLVWPNSMRDGAESKLTLVPDDRERSPRSLSFTGPWAMFRLLTNGQLTQV 1120

Query: 1138 SQTSVDFKFIVDGGEMIYRINAEADANPFTERLFKSFKLSKTLY 1181
            +  + D +F ++ G M YR+  +A  NPF   LF  FKL  +LY
Sbjct: 1121 NDNTFDVRFSLEQGGMTYRVYTDASHNPFAGGLFSQFKLPDSLY 1164