Pairwise Alignments

Query, 1181 a.a., type VI secretion system membrane subunit TssM from Vibrio cholerae E7946 ATCC 55056

Subject, 1165 a.a., type VI secretion system membrane subunit TssM from Dickeya dadantii 3937

 Score =  833 bits (2151), Expect = 0.0
 Identities = 459/1183 (38%), Positives = 682/1183 (57%), Gaps = 20/1183 (1%)

Query: 1    MWKFIVGIVRRLKPTVVAALPILLFTTFILLNVAIWWAGPWLEVAGYKPLESIMARVVAS 60
            M K I+  +R+  P +  +  +L    +++  V  WW GP L +   +PL+S+  RVV +
Sbjct: 1    MLKIIITFLRQQLPKLKPSWLLLGVVVWVVALVLAWWLGPRLTLGDIRPLQSVWGRVVFT 60

Query: 61   SLFTLGCLAVWGIWQ-WRKLQAFKSEQKREEQLRQDPIKVYEQRQEVELNQVMLNMKQSL 119
             L  L     +  W+ WR++Q  ++E++ ++ + QDP++VY   Q+  L++ +   +  L
Sbjct: 61   -LVWLWLGFAYSAWRVWRRVQQLRAERREQQIIEQDPLQVYVDSQQTFLDRWLQAFQTQL 119

Query: 120  NKHNYLYALPWYLVLGLENAGKTSLINRSGQNFVFSSVMRASGQKSENPYSFDWWIGDES 179
             K   LYA+PWYL +GL  +GK+SLI+R+      +  + A  ++       + W+G+ +
Sbjct: 120  GK-KALYAMPWYLAIGLSGSGKSSLIHRANPANKLNPKLDAELREVAGGQQVNSWVGESA 178

Query: 180  VLIDPDGELLTQGNRSEENDGALERRLWLHFVDWLDRTRSRRPLNGIVLALDVAHLATAT 239
            V+ DP G+LL Q     E       RLW H + WL   R R+PLNG+VL +D++ L+ A+
Sbjct: 179  VIWDPSGQLLAQPEVGAEPSAGRHARLWQHLLQWLSLNRRRQPLNGLVLTIDLSWLSQAS 238

Query: 240  ASERKAYANLLRARLRELMETLSTRLPVYIALTKLDLLHGFEPFFKHYTKSQREEVLGFT 299
             SERKAYA ++RARL+E+   ++TRLP+Y+ALT+LD+L GF+  ++   +  R+ VLG T
Sbjct: 239  VSERKAYAQVMRARLQEIAVNINTRLPLYVALTRLDMLRGFDVVYRSLNREARQAVLGVT 298

Query: 300  FSMDSVDNLDSWLEEFASEYTQFVSRVNGMLPHAVAAPMTLEERNAIYSFTRQISGLKEI 359
            F+  +      WLEE    +  +++ +N  LP  +        RN +++F RQ++GLK+ 
Sbjct: 299  FTPQASHG-KGWLEELERFWDDWIANLNNNLPEMLLTQSDRGVRNTLFTFVRQLAGLKDY 357

Query: 360  LQQFFQEALASDQFSTSALVRGAYFTSVYQQGVPTNAFDDAASRRYGLSHAINTAQRAKN 419
            + +   E LA+     + LVRG Y +SVYQQGVP +AF  +ASRRY L   IN A R ++
Sbjct: 358  VTEVLNETLATGD-DRAFLVRGVYVSSVYQQGVPFDAFSQSASRRYQLPEPINAAMRGES 416

Query: 420  STVYFTQKLFTHIIYPEAGLASDNFRVAKNKRRLMGLSFVACSVATLLLAGTWHRNYLNN 479
            +T +F QKLF  +I+PEA LA +N   +  +RR M +      +  L + G+WH  Y  N
Sbjct: 417  NT-FFVQKLFPEVIFPEASLAGENRLHSLYRRRRMSIGITCMVLFGLAMIGSWHHFYRVN 475

Query: 480  VQHADTVLTKVNQYKEQFPTSRSLASQREVLDPLNKIREATLEFGFFRDKPQYISDFGLY 539
             +    VLTK   +              + L  LN IR+ATL FG + ++   ++D GLY
Sbjct: 476  EEAGRNVLTKAQAFIGTNELEGQAGYGYQQLPRLNLIRDATLSFGNYHERTPMLADLGLY 535

Query: 540  QGHTIGPKVEETYLNLLETRFLPLLMADTIVALNQAET-DEEKLAVLRVYRMLVDKSGRY 598
            QG  IGP VE +YL +L  RFLP +M   +  LNQA    E+KL +LRV RML D SGR 
Sbjct: 536  QGDKIGPYVEGSYLQMLNQRFLPAVMQGLLEDLNQAPAGSEQKLTILRVMRMLDDASGRN 595

Query: 599  QDYVMDYFAKYWQKSFSGQRQIQEELLGHLDYAMRHTDLTAERLNGDKGAEQVMRPYDKV 658
            +  V  + A  WQK+F GQ ++QE+L+ HLDYA+ HTD    R   D  A     P+   
Sbjct: 596  KTLVEQFMALRWQKAFPGQGRVQEQLMQHLDYALDHTDWHQSREQKDTVAISTFAPFVDP 655

Query: 659  IARAQVELGSMPNDQRVYRNLKLSAQTVLGPSVNLRSLIGPVFDVVFEERVLNSSSLFIP 718
            IA AQ EL  +P  QRVY++L + A  VL P + +R  +GP FD VF  R  N  +  +P
Sbjct: 656  IAGAQRELSKLPMYQRVYQSLVMKATQVLPPDLAIRDEVGPTFDSVFTLR--NDKAGTVP 713

Query: 719  QMLTKRGFDDYFMPQSESVSELALIDSWVLGQSKTAQFSEADKQALREKIRDLYVADYTN 778
            ++LT  GF D+++ Q +++ +L  +D+WVLGQ + A  SEAD++ +  ++ D Y+ DY N
Sbjct: 714  RLLTYPGFSDFYLKQDKTLLDLTALDAWVLGQRERAHLSEADRKEILRQVNDRYITDYIN 773

Query: 779  TWRAALNEIDVKYFNDINDAVMVLENITSNLEPMQRLLRTLDDNTQLYSALPKDESALKE 838
             W+ AL  IDV+       A+ +L +IT N +P QR+L T+ DNT++   L  DE+   +
Sbjct: 774  QWQKALANIDVQPLESPEQALNILTDITGNDQPFQRVLTTVSDNTRIRK-LADDENDTAQ 832

Query: 839  LLKSPKYKVASMIETPFADLNGMLKPVGSKPAYMTEVLASVDELKSYLKSIQDAPDVGMA 898
                    + + I  PF  +N  L   G +   + EV   + +L  YL  I +A D G A
Sbjct: 833  -------GINTRIGRPFMTINAALSGRGEQGPLVQEVNQKLTDLYHYLDQIVNATDPGQA 885

Query: 899  ALDATKARVKLVNADPIYTLKRISSGLPKPLDSMMAKLADESWYVVKQEAIKHLEVRWTE 958
            AL A +AR     ADP++ L++ +  LP PLD  + +LA ES  +V   A+  L   W +
Sbjct: 886  ALKAVQARQGNKFADPVFALQQYARSLPAPLDRWVGQLAGESASLVTGLAMSSLNQEWLD 945

Query: 959  DVYKTFQSKLAGRYPFNPASNKDVALADFEAFFAPNGTLDNFYNQQLKMFIDENISVASD 1018
             V   F  KLA RYPFNP+S+KDV L++ E FFA  GTLD+FY   LK  +D  +    +
Sbjct: 946  KVVTPFNEKLADRYPFNPSSDKDVPLSEMERFFATGGTLDSFYQTNLKSIMDSGML---E 1002

Query: 1019 DSAQSIIRKEVLDQIKQAQKIREAFFNRKGILDVSFSVEPLSLSNNKRRSVLNVDGQFLA 1078
                S ++ E++ Q+ +A +IR+  FN +G L++ F VEP+ L+ NKRRSVLN+DGQ L 
Sbjct: 1003 GEGASPLQTELVKQLDRATRIRQTLFNAQGSLEIHFVVEPVELTANKRRSVLNLDGQLLE 1062

Query: 1079 YSHGPRENVELIWPNTLRDSAVSKVTLIPTQTNMSPRSLQIQGPWAFFRLLDQGDVVSAS 1138
            YSHG R    L+WPN++RD A SK+TL+P     SPRSL   GPWA FRLL  G +   +
Sbjct: 1063 YSHGRRTKTPLVWPNSMRDGAESKLTLVPDDRERSPRSLSFTGPWAMFRLLTNGQLTQVN 1122

Query: 1139 QTSVDFKFIVDGGEMIYRINAEADANPFTERLFKSFKLSKTLY 1181
              + D +F ++ G M YR+  +A  NPF   LF  FKL  +LY
Sbjct: 1123 DNTFDVRFSLEQGGMTYRVYTDASHNPFAGGLFSQFKLPDSLY 1165