Pairwise Alignments

Query, 469 a.a., type VI secretion system protein TssA from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., type VI secretion system protein TssA from Pantoea agglomerans CFBP13505 P0401

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 68/300 (22%), Positives = 111/300 (37%), Gaps = 31/300 (10%)

Query: 183 AEQRQQVTAQSSAERETPSAATPSPAASMVVDHSSDKAAKQTLLKVADFLAEQEFGIALS 242
           A   Q     S+    T  AA P  AA       S+    + L  ++ ++ EQ  G   +
Sbjct: 207 ATSGQDHAGDSTHSTPTSGAAVPETAAV-----KSEVELVRQLRVLSGWVVEQPQGWLAA 261

Query: 243 IRLRRFAVWGSITSLPDHKPDGETLLRGMQADRVKDYQDQLRHPDLAL-WRKVEQSLTMA 301
            R+ + A W  +T LP     G T L   + D    Y+ QL+   L   W ++ + + + 
Sbjct: 262 HRMMKAARWDLVTQLPALDASGRTRLLPPKPD----YRAQLKRLYLQQGWTELIEQVDVM 317

Query: 302 ------PYWFEGQWMSYTIAQQLGK--SDWCQAIAEETQQFLRRLPSLLELKFKGGEPFV 353
                  +W + QW  +    + G     W   I  + +  L+RLP L  L +  G P  
Sbjct: 318 FTEGGNRFWLDLQWYLWQGLSRAGAPWEHWADYILSDLKLLLKRLPGLETLAWNDGTPLA 377

Query: 354 SDSVKEWLA--------SVGQSQGAAGQSVGGDWQEKRKEAFQLAKEGGIAVALSMLND- 404
            +    W+A           +       +   D      EA +     G   AL  L   
Sbjct: 378 DEVTLNWIAEKVNNDMPGFNEEPAVLQGTQTDDIFALEAEAMEKGDSDGPETALGWLQSR 437

Query: 405 -GLVSAVEPRDKFYWRLLSADLLRANHLDAMAGEQYQTLLNQVTTLSVPEWEPSLVEQIQ 463
            G+ S   PR ++  RLL A +      + +A      L      L++ +WEP L+  +Q
Sbjct: 438 PGMDS---PRSRWLLRLLMARVAEQYGRNELALHLLGELTASAPQLTLSDWEPGLLFDVQ 494