Pairwise Alignments

Query, 469 a.a., type VI secretion system protein TssA from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., type VI secretion-associated protein, VC_A0119 family from Enterobacter asburiae PDN3

 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 94/476 (19%), Positives = 169/476 (35%), Gaps = 47/476 (9%)

Query: 13  PISSSNPVGERLVDHPLFDFIEDQMMKVGSLSHASVQWDEVEHSTL--KLLGEQSKDIKL 70
           PIS + P GE       F  I +++ K+  +    +        TL  KLL   +KDI++
Sbjct: 35  PISDTRPAGEEPGYDDDFQRIREEVNKLSGIDTGLI-------CTLAEKLLTTTAKDIRI 87

Query: 71  LVYLLQCLHNQVTPTRLITSFAVMSEFLNQYWNDSYPAPGPRGNLPRRKFFSQMAQRFTT 130
             Y      +Q           +++  L  Y    +P    R   P  ++ +    R   
Sbjct: 88  ATYYCWARLHQDGEAGFAEGLELLAGLLQHYGAQLHPQR-ERSRKPALEWLA--GSRLLD 144

Query: 131 VIEKFDFHHLDEADRQALQAAVEEWQQAVEKQGLSSEL------VESVVVRITAEIKRAE 184
            +  +     D+A R      +       E +    +L      +ES +++         
Sbjct: 145 SLSLWPEVVRDDAMRTTGALLLIRSSLDAESEASCPDLNALYSAMESRLLKAGGVDALVP 204

Query: 185 QRQQVTAQSSAERETPSAATPSPAASMVVDHSSDKAAKQTLLKVADFLAEQEFGIALSIR 244
           Q      QS     T      +PA S +          +TL   A +L EQ  G   + R
Sbjct: 205 QNASNNPQSQTSAHTTEH--DAPALSRITSGQDLLTQARTL---AGYLREQPDGWLPAHR 259

Query: 245 LRRFAVWGSITSLPDHKPDGETLLRGMQADR---------VKDYQDQLRHPDLALWRKVE 295
           L +     ++ ++P    +G+T +   +AD+          + + + L H D    R   
Sbjct: 260 LMKSLRHDTMRAIPAPDAEGKTRIEPPRADQRAMLKRLYLQQSWLEILEHADSTFSRGAN 319

Query: 296 QSLTMAPYWFEGQWMSYTIAQQLGKSDWCQAIAEETQQFLRRLPSLLELKFKGGEPFVSD 355
                   W + QW  +    +LG+      I  + +  LRRL  L  L F  G PF  +
Sbjct: 320 H------LWLDLQWYIHQALVKLGQDVLADIIIADLRGLLRRLTGLETLAFNDGTPFADE 373

Query: 356 SVKEW--------LASVGQSQGAAGQSVGGDWQEKRKEAFQLAKEGGIAVALSMLNDGLV 407
               W        +++      +A    G D     +EA + A   G+   L  L     
Sbjct: 374 VTLNWINQSVLDDMSNWRDEPISAVSETGNDILALEREALEKADMDGLDTTLHWLQT-RP 432

Query: 408 SAVEPRDKFYWRLLSADLLRANHLDAMAGEQYQTLLNQVTTLSVPEWEPSLVEQIQ 463
                +DK+  RLL A +      + +A      L     ++++ +W P+L+ +++
Sbjct: 433 GTDSMKDKWLLRLLMARVAEQKGKNELALHLLGELDGAAQSITLTQWTPALLFEVK 488