Pairwise Alignments

Query, 469 a.a., type VI secretion system protein TssA from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., type VI secretion system protein TssA from Dickeya dianthicola ME23

 Score =  248 bits (632), Expect = 4e-70
 Identities = 158/466 (33%), Positives = 237/466 (50%), Gaps = 39/466 (8%)

Query: 26  DHPLFDFIEDQMMKVGSLSHASVQWDEVEHSTLKLLGEQSKDIKLLVYLLQCLHNQVTPT 85
           D PL++ +E  ++K+GSL+H+ V  + V    L LL  ++KD+++LV LL+CL +    T
Sbjct: 26  DDPLWEKVETALVKLGSLAHSQVDLNAVAGQCLTLLESRTKDMRVLVQLLRCLQHPAKAT 85

Query: 86  RLITSFAVMSEFLNQYWNDSYPAPGPRGNLPRRKFFSQMAQRFTTVI----EKFDFHHLD 141
              T+  ++  +L  YW  ++PA      + ++K   Q+ +RF  V+    E      L 
Sbjct: 86  PFATAIMLLDSWLEAYWTLAFPASA----VQKQKLMVQIIRRFEGVLPRVAENASGAELS 141

Query: 142 EADRQALQAAVEEWQQAVEKQGLSSELVESVVVRITAEIKRAEQRQQVTAQSSAERETPS 201
           +  + A Q A      A +K  L+ EL         A + RA QR Q   +++   E  S
Sbjct: 142 QLHQLAEQLAARWRTLAADKAELTDELA--------ASLHRARQRHQAQEKANQAAEPAS 193

Query: 202 -------------------AATPSPAASMVVDHSSDKAAKQTLLKVADFLAEQEFGIALS 242
                              + T S AA++ ++ S D+  KQT L VA  LAE++    + 
Sbjct: 194 GGPGGTSGGDAAAGGGNGGSGTASAAATVDINSSDDRHWKQTQLTVAALLAERQPEAPVG 253

Query: 243 IRLRRFAVWGSITSLPDHKPDGETLLRGMQADRVKDYQDQLRHPDLALWRKVEQSLTMAP 302
            RLRR AVW  I + P      +T L  +  DRV +Y   L   DLALW K+EQSLT+AP
Sbjct: 254 YRLRRNAVWAGIATPPPAARGNKTQLAPVSPDRVDEYHSALAQADLALWNKIEQSLTLAP 313

Query: 303 YWFEGQWMSYTIAQQLGKSDWCQAIAEETQQFLRRLPSLLELKFKGGEPFVSDSVKEWLA 362
           YWF+G  +S T+A +LG S    AIA+E   FL RLP L EL F  G PF+S    +WL 
Sbjct: 314 YWFDGHLLSATVATRLGHSAVAGAIADELSAFLARLPELRELAFSDGSPFLSAKCAQWLQ 373

Query: 363 SVGQSQGAAGQSVGGDWQEKRKEAFQLAKEGGIAVALSMLNDGLVSAVEPRDKFYWRLLS 422
           S   ++G  GQ       +   EA     E G+  ALS+L++ +    EPR++F   L+ 
Sbjct: 374 SAQSARGGGGQR----QDDLAAEAAACCAEQGLGAALSLLDERIRRLKEPRERFCAELVL 429

Query: 423 ADLLRANHLDAMAGEQYQTLLNQVTTLSVPEWEPSLVEQIQRYTTS 468
           ADLL    + A+A + YQ L  +   L + +WEP +V +++R   S
Sbjct: 430 ADLLAEEGMKALAAQHYQHLWQESERLGLMQWEPGMVSRLERLGAS 475