Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., Nif-specific regulatory protein from Xanthobacter sp. DMC5

 Score =  218 bits (556), Expect = 4e-61
 Identities = 152/398 (38%), Positives = 218/398 (54%), Gaps = 31/398 (7%)

Query: 158 DMEREEQRRLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSV 217
           D ER       L++ L++++  SA R         +IG+S  ++ L ++I+  A S   V
Sbjct: 195 DRERLMAESGRLQKELSELKPTSAGRERKRVYVDGIIGDSREIRGLLDKIMIVAKSHSPV 254

Query: 218 MVQGETGTGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDK 277
           +++GE+GTGKEL+A A+HELS R   PF+ +NCAA+PE +LESELFG+ KGAF+GA   +
Sbjct: 255 LLRGESGTGKELIAKAIHELSPRAKGPFIKLNCAALPESVLESELFGHEKGAFTGAVGAR 314

Query: 278 QGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNL 337
           +G    A+ GTLFLDEIG++  + QAKLLRVL+ + F  +GG   L  + R+V+AT+ NL
Sbjct: 315 KGRFELADKGTLFLDEIGEISPSFQAKLLRVLQEQEFERVGGSHTLKVNVRVVAATNKNL 374

Query: 338 LDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRA 397
            + V K EFR DLYYR+   P+ +P L  R  DI LL+  F+  FN + N R    N  A
Sbjct: 375 EEAVAKNEFRADLYYRISVIPVIVPSLRDRRGDIPLLANEFLDRFN-RENGRDLHFNQDA 433

Query: 398 IDCLKQYDFPGNVRELKHLIEFGCAQTADGTQVEASCFAHR--------LQTLPCLAPEA 449
           +D L    FPGNVREL++ ++   A  A G  +    FA R        L   P  AP+ 
Sbjct: 434 MDVLMGCGFPGNVRELENCVQ-RTATLAQGGSIVGDDFACRHNECLSALLWRSPADAPQT 492

Query: 450 -------TPV-----AVSVETENVD----LEPSVALAGEPNFAV---IHDLKQAVSQFEA 490
                   PV     A+S E  N +    L P       P  AV      L + +S+ E 
Sbjct: 493 RRPMEIPLPVMPPLSAISGEAANSNTVPRLPPLTVPVPTPAPAVPVRATVLDEEMSERER 552

Query: 491 LIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKLEIK 528
           L+  + + R    +AKAA+ LG+  R + Y   K +I+
Sbjct: 553 LV--DAMERAGWVQAKAARLLGLTPRQIGYALKKHDIE 588