Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  221 bits (564), Expect = 4e-62
 Identities = 140/400 (35%), Positives = 210/400 (52%), Gaps = 34/400 (8%)

Query: 148 VFSQQWSLLN----DMEREEQRRLELKQSLTDIE---------------RDSAQRSLANA 188
           V  Q W LL     D ER E+  L+  Q+   +                R    R  +  
Sbjct: 123 VDDQPWGLLTLDALDTERFERVELDALQAFASLAAATVNVAERIERLTLRAEIYREASGQ 182

Query: 189 LSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAI 248
             + +IG+S   ++L E+I     S L+V++ GETG GKELVA A+H  S+R   P +++
Sbjct: 183 QHKEMIGQSKPHKRLVEEIKLVGGSDLTVLITGETGVGKELVAQAIHAASTRADKPLISL 242

Query: 249 NCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRV 308
           NCAA+PE L+ESELFG+ +GAF+GA ++++G    ANGGTLFLDE+G++ LT+QAKLLRV
Sbjct: 243 NCAALPETLVESELFGHVRGAFTGALNERRGKFELANGGTLFLDEVGELSLTVQAKLLRV 302

Query: 309 LESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARL 368
           L+S   + LG  +E   D RL++AT+ +L D+VR   +R D Y+RL  YP+ +P L  R 
Sbjct: 303 LQSGQLQRLGSDKEHQVDVRLIAATNRDLADEVRNGRYRADFYHRLSVYPLQVPALRERG 362

Query: 369 EDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADGT 428
            D+ LL+  F+     +       L   A   L  Y++PGNVREL+HLI     +     
Sbjct: 363 RDVLLLAGFFLEQNRSRMGLGSLRLTSDAQAALLAYNWPGNVRELEHLIGRSALKALGNC 422

Query: 429 QVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVSQF 488
           +      +   Q L    P+ +   +  +T +  +             V  DL+QA  Q+
Sbjct: 423 RERPKILSLNAQDLD--LPDVSAPLIEEQTGSAPV-------------VTGDLRQATEQY 467

Query: 489 EALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKLEIK 528
           +  +IS  L R   + A AA+ LG+ +  L     +L +K
Sbjct: 468 QRQVISACLERHQHNWASAARELGLDRANLGRMAKRLGLK 507