Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 510 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  230 bits (586), Expect = 1e-64
 Identities = 140/335 (41%), Positives = 188/335 (56%), Gaps = 32/335 (9%)

Query: 193 LIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAA 252
           LIG S+AM +    I     +  +V+++GETGTGKE+VA A+H    RKS  FV  NCAA
Sbjct: 199 LIGSSSAMDETYRLIGKVMQTPYTVLLRGETGTGKEVVARAIHAAGPRKSKAFVVQNCAA 258

Query: 253 IPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLESR 312
            PE LLESELFGY KGAF+GA+ +  GL   A+GGTL LDEIGDMPL+LQAKLLRVL+  
Sbjct: 259 FPEGLLESELFGYRKGAFTGAERNHVGLFDAAHGGTLLLDEIGDMPLSLQAKLLRVLQEG 318

Query: 313 TFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDIE 372
             RPLG       D R+++ATH +L   V +  FR+DLYYRL Q+PI LP L  R  D+ 
Sbjct: 319 EVRPLGASAAHKVDVRIIAATHRDLAAMVAQGSFREDLYYRLAQFPIELPPLRERDGDVL 378

Query: 373 LLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADGTQVEA 432
           LL+  F +  ++         +  A+D L  Y FPGNVRELK L+E       DG     
Sbjct: 379 LLAREFAQQASIALGRVPVSWSSAALDQLSSYAFPGNVRELKCLVERAVLLCDDGV---- 434

Query: 433 SCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVSQFEALI 492
                             PV +S+             A   N AV   L+Q + + E + 
Sbjct: 435 ----------------ILPVHLSLP------------APPANTAVDATLRQRLERVERVF 466

Query: 493 ISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKLEI 527
           + + L++  G+R + A+ LG+ +RTL Y+  +L+I
Sbjct: 467 LIDCLHKNRGNRTRTARELGVARRTLLYRLARLKI 501