Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Response regulator of zinc sigma-54-dependent two-component system from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  231 bits (589), Expect = 4e-65
 Identities = 139/353 (39%), Positives = 201/353 (56%), Gaps = 31/353 (8%)

Query: 169 LKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKE 228
           L+++L       A+   A+A    +IG S AMQ L  +I   A S  +V++ G++GTGKE
Sbjct: 117 LEKALAHTRETGAELPSASAAQFGMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKE 176

Query: 229 LVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQANGGT 288
           LVA A+H  S+R   P V +NCAA+ E LLESELFG+ KGAF+GAD  ++G   +A+GGT
Sbjct: 177 LVARALHACSARSDRPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGT 236

Query: 289 LFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQ 348
           LFLDEIGD+   +Q +LLR ++ R  + +G  Q +S D RL++ATH +L ++V    FRQ
Sbjct: 237 LFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQ 296

Query: 349 DLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPG 408
           DLYYRL    I +P L  R EDI LL++HF+R F  ++   ++G   +A+D L  YD+PG
Sbjct: 297 DLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVVKGFTPQAMDLLIHYDWPG 356

Query: 409 NVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVA 468
           N+REL++ IE            E        + LP LA  ATP+      E   ++P V 
Sbjct: 357 NIRELENAIERAVVLLTGEYISE--------RELP-LAIAATPIKTEYSGE---IQPLVD 404

Query: 469 LAGEPNFAVIHDLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYK 521
           +  E                   +I   L +  G++ +AA+ LGI ++TL  K
Sbjct: 405 VEKE-------------------VILAALEKTGGNKTEAARQLGITRKTLLAK 438