Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  235 bits (599), Expect = 4e-66
 Identities = 144/336 (42%), Positives = 200/336 (59%), Gaps = 19/336 (5%)

Query: 193 LIGESAAMQKLREQIVSAANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAA 252
           L+GE   M++L+  I   A S  SVMV GE+GTGKE+VA A+H+LS R++ PF+AINCAA
Sbjct: 272 LVGECRVMRQLKRLISRIAPSPSSVMVVGESGTGKEVVARAIHKLSGRRNKPFIAINCAA 331

Query: 253 IPEHLLESELFGYCKGAFSGADSD-KQGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLES 311
           IPE LLESELFGY KGAF+GA ++ K GLI  AN GTLFLDEIGDMPL LQAKLLR +E+
Sbjct: 332 IPEQLLESELFGYVKGAFTGASANGKTGLIQAANTGTLFLDEIGDMPLMLQAKLLRAIEA 391

Query: 312 RTFRPLGGKQELSSDFRLVSATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDI 371
           R   P+G    +  D R++SAT+ NL   + + +FR+DL+YRL   PITLP L  R EDI
Sbjct: 392 REILPIGASSPIQVDIRIISATNQNLAQFIAEGKFREDLFYRLNVIPITLPPLRERQEDI 451

Query: 372 ELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADGTQVE 431
           ELL  +F+ +   +  +   G+    ++ L+++ +PGN+REL +L+E+       G  ++
Sbjct: 452 ELLVHYFLHLHTRRLGSVYPGIAPDVVEILRKHRWPGNLRELSNLMEYLVNVVPSGEVID 511

Query: 432 ASCFAHRLQTLPCLAPEATPVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVSQFEAL 491
           ++         P L    T       TE  D    V    E + ++      A+ + E  
Sbjct: 512 STLLP------PNLLNNGT-------TEQSD----VTEVSEAHLSLDDAGGTALEEMEKQ 554

Query: 492 IISERLNRFAGDRAKAAKSLGIPKRTLAYKCLKLEI 527
           +I E L+R    + + A  LGI   TL  K  K E+
Sbjct: 555 MIREALSRH-NSKKQVADELGIGIATLYRKIKKYEL 589