Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) from Escherichia coli BW25113

 Score =  233 bits (595), Expect = 9e-66
 Identities = 145/371 (39%), Positives = 208/371 (56%), Gaps = 34/371 (9%)

Query: 156 LNDMEREEQRRLELKQSLTDIERDSAQRSLANALSRT-----LIGESAAMQKLREQIVSA 210
           L+++    QR L+L+    +I      R L  ALS +     ++  S AM  + +     
Sbjct: 109 LDELNLIVQRALQLQSMKKEI------RHLHQALSTSWQWGHILTNSPAMMDICKDTAKI 162

Query: 211 ANSQLSVMVQGETGTGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAF 270
           A SQ SV++ GE+GTGKEL+A A+H  S R   PF+ +NCAA+PE LLESELFG+ KGAF
Sbjct: 163 ALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAF 222

Query: 271 SGADSDKQGLIAQANGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLV 330
           +GA + +QGL  +AN GTL LDEIG+MPL LQAKLLR+L+ R F  +GG Q +  D R++
Sbjct: 223 TGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRII 282

Query: 331 SATHVNLLDQVRKKEFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRI 390
           +AT+ +L   V++  FR+DL+YRL    + LP L  R EDI LL+ HF++ F+ ++   I
Sbjct: 283 AATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDI 342

Query: 391 RGLNYRAIDCLKQYDFPGNVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEAT 450
             ++  A+  L  + +PGN+REL ++IE      +                 P +  E  
Sbjct: 343 IDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSG----------------PIIFSEDL 386

Query: 451 PVAVSVETENVDLEPSVALAGEPNFAVIHDLKQAVSQFEALIISERLNRFAGDRAKAAKS 510
           P  +     N   E   A  GE N      LK+ + + E  II E L +  G+R + A  
Sbjct: 387 PPQIRQPVCNAG-EVKTAPVGERN------LKEEIKRVEKRIIMEVLEQQEGNRTRTALM 439

Query: 511 LGIPKRTLAYK 521
           LGI +R L YK
Sbjct: 440 LGISRRALMYK 450