Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., two-component system response regulator GlrR from Dickeya dianthicola ME23

 Score =  221 bits (564), Expect = 3e-62
 Identities = 139/359 (38%), Positives = 196/359 (54%), Gaps = 45/359 (12%)

Query: 176 IERDSAQRSLANALSRT-----------LIGESAAMQKLREQIVSAANSQLSVMVQGETG 224
           ++RD+  +++ +AL  +           ++  S  M +L EQ    A S +SV++ G++G
Sbjct: 109 VDRDALYKAIDDALKLSPPASDESWRAAVVTRSPIMLRLLEQAKMVAQSDVSVLINGQSG 168

Query: 225 TGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQA 284
           TGKE++A A+H  S R   PF+AINC A+PE LLESELFG+ +GAF+GA S ++GL   A
Sbjct: 169 TGKEVLAQAIHAASPRAGRPFIAINCGALPEPLLESELFGHARGAFTGAVSQREGLFQAA 228

Query: 285 NGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKK 344
            GGTLFLDEIGDMPL LQ KLLRVL+ R  RPLG  +++  + R++SATH +L   + K 
Sbjct: 229 EGGTLFLDEIGDMPLALQVKLLRVLQERKVRPLGSNRDIDINVRIISATHRDLPKAMEKG 288

Query: 345 EFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQY 404
           EFR+DLYYRL    + LP L  R EDI LL+ H +R    +H   +R  +  A+  L   
Sbjct: 289 EFREDLYYRLNVVNLKLPALNERAEDIPLLANHLLREAAARHKPFVRSFSTDAMKRLMAA 348

Query: 405 DFPGNVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLE 464
            +PGNVR+L ++IE                         C+A  + PV      E     
Sbjct: 349 SWPGNVRQLVNVIE------------------------QCVALSSAPVIGDALVEQ---- 380

Query: 465 PSVALAGEPNFAVIHDLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYKCL 523
              AL GE     +    +A +QFE   + + L    G+  +AA+  G   RT  YK L
Sbjct: 381 ---ALEGEN--TALPTFVEARNQFELNYLRKLLQIAKGNVTQAARMAG-RNRTEFYKLL 433