Pairwise Alignments

Query, 530 a.a., AAA family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., Regulatory protein AtoC from Azospirillum sp. SherDot2

 Score =  227 bits (579), Expect = 6e-64
 Identities = 135/357 (37%), Positives = 204/357 (57%), Gaps = 17/357 (4%)

Query: 165 RRLELKQSLTDIERDSAQRSLANALSRTLIGESAAMQKLREQIVSAANSQLSVMVQGETG 224
           R L++++   DI     + S +    R L   S  M +L + I   A S  +V+V GE+G
Sbjct: 127 RALQMRRMRDDIATLHRELSSSYRTDRILTA-SPRMSELLQTIAKVAKSNATVLVTGESG 185

Query: 225 TGKELVAAAVHELSSRKSAPFVAINCAAIPEHLLESELFGYCKGAFSGADSDKQGLIAQA 284
           TGKELVAAA+H  S R + PFV +NCAA+PE LLESE FG+ +GAF+GA + ++G   QA
Sbjct: 186 TGKELVAAAIHYNSPRNAGPFVKVNCAAVPEGLLESEFFGHERGAFTGAQARRRGRFEQA 245

Query: 285 NGGTLFLDEIGDMPLTLQAKLLRVLESRTFRPLGGKQELSSDFRLVSATHVNLLDQVRKK 344
             GTLFLDEIGD+  +LQ KLLRVL+ R F  +GG + + +D R++ AT+ NL + VR+ 
Sbjct: 246 EHGTLFLDEIGDISPSLQVKLLRVLQEREFERVGGAELVRTDVRVIVATNRNLEEMVRQG 305

Query: 345 EFRQDLYYRLFQYPITLPRLAARLEDIELLSEHFVRVFNLQHNTRIRGLNYRAIDCLKQY 404
            FRQDLY+RL    +    L  R ED+ LL+ HF++ F  ++   + G++ +A++ L  Y
Sbjct: 306 LFRQDLYFRLNVVTLRTVPLRERPEDVRLLASHFLQRFAAENRIDVSGIDEQAMERLLAY 365

Query: 405 DFPGNVRELKHLIEFGCAQTADGTQVEASCFAHRLQTLPCLAPEATPVAVSVETENVDLE 464
            +PGN+REL + +E                    + T   +  E  P  ++    + +  
Sbjct: 366 RWPGNIRELSNAMERAVV----------------MSTGAMIVTEDLPEQIAGRAGDSEPA 409

Query: 465 PSVALAGEPNFAVIHDLKQAVSQFEALIISERLNRFAGDRAKAAKSLGIPKRTLAYK 521
                 G    +    L++ VS+FEA ++++ L R  G+R K A+ LGI +R+L YK
Sbjct: 410 TDTDSDGAAAPSAAGSLREQVSRFEARVVADALARNDGNRMKTAQQLGISRRSLLYK 466