Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 865 a.a., ATP-dependent chaperone ClpB from Rhodanobacter sp000427505 FW510-R12

 Score =  505 bits (1300), Expect = e-147
 Identities = 321/886 (36%), Positives = 494/886 (55%), Gaps = 61/886 (6%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           KL ++ + AL  A SL + R H  +   + +  LL         +L QA + V  + Q +
Sbjct: 5   KLTSRFQQALADAQSLAVGRDHNMLEPVHVMAALLGQQGGSTAPLLTQAQVNVPLLTQRV 64

Query: 72  ASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFK 131
                   +L+  P  S       QE  +    +L +    +  +   A  R D++++ +
Sbjct: 65  ------NDLLERLPKVSG------QEGNINLGNDLNRLLNLTDKL---AQQRGDQFIASE 109

Query: 132 LISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAA----AETPLGRFCTNVT 187
           L  L    ++  L        +  A    A         +Q+         L ++C ++T
Sbjct: 110 LFVLAALEDKGELGAALKAAGATKANLEAAIEQLRGGEKVQSENAEEQRQALEKYCIDLT 169

Query: 188 EQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVP 247
            +A +G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLA R++ G+VP
Sbjct: 170 ARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIIKGEVP 229

Query: 248 TQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQ 307
             L++  + +LD+G L AGA  +GEFE+RLK V++ + ++   IILFIDE HT++G+G  
Sbjct: 230 EGLRDRRVLALDMGALIAGAKFRGEFEERLKAVLNDLAKNEGQIILFIDELHTMVGAGKA 289

Query: 308 EGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDI 367
           EG  DA N+LKPALARGEL  + ATT  EY+KY EKD AL RRFQ V + EP+++  + I
Sbjct: 290 EGSMDAGNMLKPALARGELHCIGATTLDEYRKYIEKDAALERRFQKVFVGEPSVEDTIAI 349

Query: 368 LRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPP 427
           LRGL   Y   H V ITD A+ AAA LS RYI+ RQLPDKAID++D A +RI + + + P
Sbjct: 350 LRGLKERYAVHHGVEITDPAIVAAATLSHRYIADRQLPDKAIDLMDEAASRIRMEIDSKP 409

Query: 428 KRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD--------EAEKAAL 479
           + L  LE    Q +++ +ML++      E DSE       Q LAD        E E + L
Sbjct: 410 EELDRLERRLIQLKIQREMLKK------EKDSE-----SKQRLADLETDIGKLEREFSDL 458

Query: 480 TQSWQQQKSLVESIIALRAEL----MELSQAQ-EQDPDHLLVVR----TALQEQYQALDA 530
            + W+ +K+ ++    ++ ++     EL  AQ  QD   +  ++     AL++Q  A  A
Sbjct: 459 NEIWKSEKAALQGTTRVKEQIEQARQELDAAQRRQDYAKMSEIQYGKLPALEKQLAAAQA 518

Query: 531 IDHAE-RLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIE 589
            +  + +L+  +V A++IAEV++ WTG+PV +M   E  K+ H+   L + + GQ+ A+ 
Sbjct: 519 AETQDFKLVQTRVTAEEIAEVVSRWTGIPVSKMLEGERDKLLHMEDELHKRVVGQDEAVH 578

Query: 590 RIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQ 649
            +   +  +RA L  P RP G+FL +GP+GVGKTE    LAE ++     +  I+MSE+ 
Sbjct: 579 AVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTELCKALAEFMFDTTDAMVRIDMSEFM 638

Query: 650 EKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGE 709
           EKH+VSRL+G+PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V NI  Q  D G 
Sbjct: 639 EKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGR 698

Query: 710 IADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLD-EALYPEL--------AAFFKP 760
           + DG+GR +D +N V  +TSNLG Q I D  +     D EA Y  +         A F+P
Sbjct: 699 LTDGQGRTVDFRNTVIVMTSNLGSQMIQDEVESNGSDDAEAQYTRMKASVLGVVQAHFRP 758

Query: 761 ALLARM-EVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRS 819
             + R+ E++ + PL K  +  I + +L  LEK    R   ++ + +  +  + +     
Sbjct: 759 EFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAER-QLKLDVGDDALALLGNVGFDP 817

Query: 820 ENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAAEAGEFI 865
             GAR L+  I+ QL  P++  +L    +    + +++AAE  + +
Sbjct: 818 VYGARPLKRAIQQQLENPLAKQILEGRFQSG--DTVKVAAEGRQLV 861