Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 909 a.a., T6SS AAA+ chaperone ClpV (TssH) from Variovorax sp. SCN45

 Score =  663 bits (1710), Expect = 0.0
 Identities = 377/905 (41%), Positives = 546/905 (60%), Gaps = 42/905 (4%)

Query: 1   MIRIELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQA 60
           M  I    L  KLN+ +  A+E A   C  R +P V LE++   LL    SD+  V++  
Sbjct: 1   MSEISRTALFGKLNSLAYKAIEGATVFCKMRGNPYVELEHWFAQLLQAQDSDLHRVIQHY 60

Query: 61  GLEVDQVKQAIASTYSR-EQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLA 119
           GL+V  + + + +   R  +       FSP +   ++ AW  ++ +  +A++R+G I + 
Sbjct: 61  GLDVSVIAKDMTAALDRLPRGATAISDFSPHIENAIERAWTYATLQFGEAQVRTGYILVG 120

Query: 120 AL-TRADRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTD------------KN 166
            L T++ R   F L   FE +  E+L  +FA I   S E  +   D              
Sbjct: 121 MLKTQSLRNPLFGLSKQFEKVKVEDLADNFAKICDASPEAQMRAQDGTGMGSGAPGEDAG 180

Query: 167 AANPLQAAAETPLGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEA 226
           A  P        L +F  ++TE+A+ GE+DPV  R+ E+  +VDIL RRR+NNP++ GEA
Sbjct: 181 AMAPAAMGKGDALKKFAVDLTEKAKKGEMDPVTGRDEEIRQIVDILMRRRQNNPLLTGEA 240

Query: 227 GVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQ 286
           GVGK+A++EG A R+  G VP QL++V+L +LD+G LQAGAS+KGEFE+RL+ VID ++ 
Sbjct: 241 GVGKTAVVEGFAQRLARGDVPPQLKDVKLLTLDIGLLQAGASMKGEFEQRLRQVIDEVQS 300

Query: 287 SPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPA 346
           SP PIILFIDE HTL+G+G   G  DAANLLKPALARG L T+ ATTW EYKKY EKDPA
Sbjct: 301 SPTPIILFIDEIHTLVGAGGAAGTGDAANLLKPALARGNLRTIGATTWAEYKKYIEKDPA 360

Query: 347 LTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPD 406
           LTRRFQ+V++ EP   +A+ +LRG+ SV EK H V + D+A++AA +LS RYI  RQLPD
Sbjct: 361 LTRRFQVVQVPEPDEQKAILMLRGVASVLEKHHRVQLLDEAIEAAVKLSHRYIPARQLPD 420

Query: 407 KAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLR 466
           KA+ +LDTACAR+A++    P  +           +E +++ R + +G +V ++R   + 
Sbjct: 421 KAVSLLDTACARVAVSQHATPPEVEDCMRRIEGLTVEQEIIGREEAIGIDV-TKRAAQVA 479

Query: 467 NQELADEAEKAALTQSWQQQKSLVESIIALRAELMELSQ---AQEQDPDHLLVV------ 517
                 + +  AL   WQ++K LV+ ++ LRA+L   ++   + + D D    V      
Sbjct: 480 ALLAESKVQLDALNARWQEEKGLVDRLLELRAKLRAGNKPVDSVKADGDAKADVPPPQPS 539

Query: 518 --------RTALQEQYQALDAIDHAER----LMHPQVDADQIAEVIADWTGVPVDQMNTD 565
                   R AL  +   L A  HA +    L+ P VD   +A V+ADWTG+PV +M  +
Sbjct: 540 PSGGGSEDRAALLAELHELQAKIHAVQGESPLILPSVDEQAVASVVADWTGIPVGRMVKN 599

Query: 566 ELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTET 625
           E+  +  L   L Q + GQ+  +E I R + T+RA L  P +P G F+L G SGVGKTET
Sbjct: 600 EVEAVLKLADTLNQRVIGQKHGLEMIARRIQTSRARLDNPQKPIGVFMLCGTSGVGKTET 659

Query: 626 VVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVV 685
            + LAE LYGG+Q + TINMSE+QE HTVS L G+PPGYVGYGEGG+LTEA+R+ PYSVV
Sbjct: 660 ALALAEALYGGEQNIITINMSEFQEAHTVSTLKGAPPGYVGYGEGGILTEAVRRRPYSVV 719

Query: 686 LLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPA- 744
           LLDEVEKAHP+V  IF+Q FDKG + DGEGR+ID +N +  LT+N G + ++    +P  
Sbjct: 720 LLDEVEKAHPDVHEIFFQVFDKGWMEDGEGRMIDFKNTIILLTTNAGSELVMSMCRDPEL 779

Query: 745 -----KLDEALYPELAAFFKPALLARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYN 799
                 L +AL   L   F PALL R+  IPY PL  +++ +IVR +L R++K  +  + 
Sbjct: 780 LPDSNALADALKAPLMKVFPPALLGRIVTIPYYPLSPDMMKKIVRLQLGRIKKRVEANHG 839

Query: 800 AEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAA 859
                 ++++D++++R    E+G R+++AI+   +LP +S+  L +LA    + R+ L  
Sbjct: 840 VPFDYSDAVVDQVVARCQDPESGGRVIDAILTNTVLPTISVEYLQRLASGGEIRRVALDV 899

Query: 860 EAGEF 864
           +  +F
Sbjct: 900 KDADF 904