Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., chaperone protein ClpB from Vibrio cholerae E7946 ATCC 55056

 Score =  506 bits (1303), Expect = e-147
 Identities = 326/860 (37%), Positives = 489/860 (56%), Gaps = 58/860 (6%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           +  ++ ++A+  A SL + R H  +   + +  LLD   S +R +L    ++V Q++  +
Sbjct: 5   RFTSKFQIAISDAQSLALGRDHQYIEPVHLMVALLDQNGSPIRPLLTMLNVDVMQLRSKL 64

Query: 72  ASTYSREQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSFK 131
                  ++LD  P  S +  ++   + L S   L             A  R D Y+S +
Sbjct: 65  G------EMLDRLPKVSGIGGDVQLSSALGSLFNLCDK---------VAQKRQDAYISSE 109

Query: 132 LISLFEGINRE----NLKKHFAMILSDSAETAVAK-------TDKNAANPLQAAAETPLG 180
            I L   I  +    +L K F +     +E A+ K        D NA    QA     L 
Sbjct: 110 -IYLLAAIEDKGPLGHLLKEFGLTEKKVSE-AIEKIRGGQKVNDPNAEELRQA-----LE 162

Query: 181 RFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALR 240
           +F  ++TE+A  G+LDPV+ R++E+   + +L RR KNNP+++GE GVGK+A++EGLA R
Sbjct: 163 KFTIDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGEPGVGKTAIVEGLAQR 222

Query: 241 VVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHT 300
           ++  +VP  L+   + SLD+G L AGA  +GEFE+RLK V++ + +    IILFIDE HT
Sbjct: 223 IINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNIILFIDELHT 282

Query: 301 LIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPT 360
           ++G+G  EG  DA N+LKPALARGEL  V ATT  EY++Y EKDPAL RRFQ V +DEPT
Sbjct: 283 MVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPT 342

Query: 361 IDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIA 420
           ++  + ILRGL   YE  H+V ITD A+ AAA LS RYIS RQLPDKAID++D A + I 
Sbjct: 343 VEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIR 402

Query: 421 INMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALT 480
           + + + P+ L  LE    Q ++E   L        E   +RL +L  +    E + A L 
Sbjct: 403 MQIDSKPEALDKLERKIIQLKIEQQALSNEH---DEASEKRLAILNEELQEKERDYAELE 459

Query: 481 QSWQQQKSLVESIIALRAEL----MELSQAQEQ-DPDHLLVVRTA-LQEQYQALDAIDHA 534
           + W+ +K+ +     ++A L    M+L  A+   D + +  ++   + E  + LD    A
Sbjct: 460 EVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMSELQYGRIPELEKQLDLAAQA 519

Query: 535 E----RLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIER 590
           E     L+  +V   +IAEV++  TG+PV +M   E  K+  +  +L + + GQ+ A+E 
Sbjct: 520 EMQEMTLLRNKVTDAEIAEVLSKQTGIPVSKMLEAEKEKLLRMEDVLHKRVIGQKEAVEV 579

Query: 591 IHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQE 650
           +   +  +RA L  P RP G+FL +GP+GVGKTE    LA  L+  +  +  ++MSE+ E
Sbjct: 580 VANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLANFLFDSEDAMVRVDMSEFME 639

Query: 651 KHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEI 710
           KH+V+RL+G+PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V NI  Q  D G +
Sbjct: 640 KHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRL 699

Query: 711 ADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLD-----EALYPELAAFFKPALLAR 765
            DG+GR +D +N V  +TSNLG   I    +  A+LD     E +   ++  F+P  L R
Sbjct: 700 TDGQGRTVDFRNTVVIMTSNLGSSRI---QENFARLDYQGIKEQVMDVVSKHFRPEFLNR 756

Query: 766 M-EVIPYLPLGKEVLAQIVRGKLARL-EKLFKTRYNAEVVIEESLIDEILSRATRSENGA 823
           + E + + PLG+E +  I   +LARL ++L +  Y  EV  ++  +D I         GA
Sbjct: 757 VDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQLEV--DDEALDLIAHVGFDPVYGA 814

Query: 824 RMLEAIIEGQLLPPVSLALL 843
           R L+  I+  +  P++ ++L
Sbjct: 815 RPLKRAIQQNVENPLAKSIL 834