Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., Chaperone protein ClpB (ATP-dependent unfoldase) from Sphingobium sp. HT1-2

 Score =  510 bits (1313), Expect = e-148
 Identities = 318/811 (39%), Positives = 463/811 (57%), Gaps = 46/811 (5%)

Query: 10  IAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQ 69
           + K   ++K  L+ A ++ I   H  ++ E+ L  LL++       ++K AG +     +
Sbjct: 3   LEKFTDRAKGFLQSAQTVAIRMNHQRISPEHLLKALLEDEQGMASGLIKAAGGDAATALR 62

Query: 70  AIASTYSREQVLD-----TYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIF------L 118
              +  ++   +        P      V +L  A        EQ   ++G  F      L
Sbjct: 63  ETDAALAKVPAVSGSGAQQTPGLDNDAVRVLDSA--------EQVAQKAGDSFVTVERLL 114

Query: 119 AALTRADRYLSFKLISLFEGINRENLKKHFAMILSD-SAETAVAKTDKNAANPLQAAAET 177
            ALT A    + K ++   G+  E L      +    +A+TA A+   +A          
Sbjct: 115 LALTLATTTTAGKALAT-AGVRAEALNGAINQLRGGRTADTAGAEDRYDA---------- 163

Query: 178 PLGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGL 237
            L +F  ++T+ A+ G+LDPV+ R+ E+   + IL RR KNNP+++GE GVGK+A+ EGL
Sbjct: 164 -LKKFARDLTDAAKAGKLDPVIGRDEEIRRTIQILARRTKNNPVLIGEPGVGKTAIAEGL 222

Query: 238 ALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDE 297
           ALR+  G VP  L++  L +LD+G L AGA  +GEFE+RLKGV+D +K +   IILFIDE
Sbjct: 223 ALRIAHGDVPDTLKDRTLMALDMGSLIAGAKYRGEFEERLKGVLDEVKGADGQIILFIDE 282

Query: 298 AHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLD 357
            HTLIG+G  EG  DA NLLKPALARGEL  + ATT  EY+KY EKDPAL RRFQ V + 
Sbjct: 283 MHTLIGAGKSEGAMDAGNLLKPALARGELHCIGATTLDEYRKYVEKDPALQRRFQPVFVG 342

Query: 358 EPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACA 417
           EPT++  + ILRG+   YE  H V I D A+ AAA LS RYI+ R LPDKAID++D A +
Sbjct: 343 EPTVEDTISILRGIKDKYEAHHGVRIADGAIVAAATLSNRYITDRFLPDKAIDLMDEAAS 402

Query: 418 RIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKA 477
           RI + + + P+ +  L+    Q Q+E + L++      +   +RL  L       E + A
Sbjct: 403 RIRMEVESKPEEIENLDRRIMQLQIEREALKKE---SDQASKDRLANLETDLANLEQQSA 459

Query: 478 ALTQSWQQQKSLVESIIALRAEL----MELSQAQ---EQDPDHLLVVRTALQEQYQALDA 530
            LT  WQ +K  + S   L+ +L    ++L QAQ   +      L   T  Q + Q  +A
Sbjct: 460 ELTTRWQAEKDKIASEAKLKEQLDAARLQLEQAQRGGDYGKAGELQYGTIPQLEKQLAEA 519

Query: 531 IDHAE-RLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIE 589
              ++  ++  +V A+ IA V++ WTG+PVD+M   E  K+  + + LG+ + GQ  A+ 
Sbjct: 520 QGASKGAMLREEVTAEDIASVVSRWTGIPVDRMMEGEREKLLAMEAELGKRVIGQADAVR 579

Query: 590 RIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQ 649
            +   +  +RA L+ P RP G+FL +GP+GVGKTE    LA  L+  +  +  I+MSE+ 
Sbjct: 580 AVATAVRRSRAGLQDPNRPLGSFLFLGPTGVGKTELTKALAGFLFDDESAMVRIDMSEFM 639

Query: 650 EKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGE 709
           EKH+V+RLIG+PPGYVGY EGGVLTEA+R+ PY VVL DEVEKAH +V N+  Q  D G 
Sbjct: 640 EKHSVARLIGAPPGYVGYEEGGVLTEAVRRRPYQVVLFDEVEKAHGDVFNVLLQVLDDGR 699

Query: 710 IADGEGRVIDCQNIVFFLTSNLGYQTIVDYA-DEPA-KLDEALYPELAAFFKPALLARM- 766
           + DG+GR +D  N +  LTSNLG Q I     DEP  K+++ +   + + F+P  L R+ 
Sbjct: 700 LTDGQGRTVDFTNTIIVLTSNLGSQYIAAQPDDEPVEKVEDQVMEMVRSHFRPEFLNRLD 759

Query: 767 EVIPYLPLGKEVLAQIVRGKLARLEKLFKTR 797
           E+I +  LG   +A IV  ++AR++KL K R
Sbjct: 760 EIILFHRLGAGHMAPIVDIQVARVQKLLKDR 790