Pairwise Alignments
Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056
Subject, 940 a.a., putative Chaperone-associated ATPase from Pseudomonas putida KT2440
Score = 485 bits (1249), Expect = e-141
Identities = 301/839 (35%), Positives = 466/839 (55%), Gaps = 84/839 (10%)
Query: 9 LIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVK 68
L ++++ S+ L++AA E EV E+ L L D+ + V+ +L Q ++VD++K
Sbjct: 125 LASRISEHSEALLQEAAKRATEFGRSEVDTEHLLLALADSDV--VKTILSQFKIKVDELK 182
Query: 69 QAIASTYSR-EQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRY 127
+ I + R ++ + SP + + L A++ +S EL A + FL L
Sbjct: 183 RQIEAEAKRGDKPFEGEVGVSPRVKDALSRAFV-ASNELGHAYV-GPEHFLIGLAEEGEG 240
Query: 128 LSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETP-LGRFCTNV 186
L+ L+ + G+ + L++ + ++ AE A +A ETP L ++ ++
Sbjct: 241 LAANLLRRY-GLMPQALRQCVSKVVGKGAEDGRA----------EAPTETPELDKYSRDL 289
Query: 187 TEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKV 246
T AR+G+LDPV+ R E+ +++L RR+KNNP+++GE GVGK+A++EGLA R+VAG+V
Sbjct: 290 TRMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRMVAGEV 349
Query: 247 PTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGN 306
P L++ L L++ L AGA +GEFE+R++ V+ I + +ILFIDE HT++G+G
Sbjct: 350 PETLRDKRLVELNINSLVAGAKYRGEFEERVQKVLKEIAEHQGELILFIDEVHTIVGAGQ 409
Query: 307 Q--EGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQA 364
EGG D AN+ KP +ARGEL+ + ATT EY+KY E+D AL RRFQ V + EPT+ Q
Sbjct: 410 GGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEQDAALERRFQPVVVPEPTVAQT 469
Query: 365 VDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMT 424
+ ILRGL +E H V IT++A+ AAAELS RY+S R LPDKAID+LD A AR+ ++ T
Sbjct: 470 IMILRGLRDTFEAHHKVSITEEAIIAAAELSDRYVSARFLPDKAIDLLDQAAARVKLSAT 529
Query: 425 TPPKRLALLETLCHQRQLEID-MLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSW 483
P + +E+ HQ + E D R Q+ S+R++ A EAE + W
Sbjct: 530 ARPVAVQEMESELHQLRREQDYAASRKQYDNAAQISKRVE-------ATEAELKQRVEEW 582
Query: 484 QQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHPQVD 543
++++ + +V
Sbjct: 583 ERERGSGST------------------------------------------------EVK 594
Query: 544 ADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARADLR 603
A+ +A++++ TG+PV+++ +E K+ HL L + + GQ+ A+ + + +RA LR
Sbjct: 595 AEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVADAVRLSRAGLR 654
Query: 604 RPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPG 663
+P FL +G +GVGKTE LAE +YG + L I+MSEY E+H+V+RL+G+PPG
Sbjct: 655 EGSKPVATFLFLGSTGVGKTELAKALAETIYGDESALLRIDMSEYGERHSVARLVGAPPG 714
Query: 664 YVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDCQNI 723
YVGY EGG LTE +R+ PYSV+LLDE+EKAH +V NI Q FD G + DG+GRV+D N
Sbjct: 715 YVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHADVYNILLQVFDDGRLTDGKGRVVDFTNT 774
Query: 724 VFFLTSNLGYQTIVDYADEPAKLDE-------ALYPELAAFFKPALLARM-EVIPYLPLG 775
+ TSNLG I P E + L F+P L R+ E+I + LG
Sbjct: 775 IIIATSNLGSDIIQRRLKAPGAAGEEYEKTKVEVMEVLRGHFRPEFLNRIDEIIVFHALG 834
Query: 776 KEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQL 834
K+ + IV +L R+ + ++ + +E+L+D + + E GAR L+ +I +L
Sbjct: 835 KQEIRHIVGLQLERVARNAASQ-GVTLTFDETLVDHLAQVGYKPEFGARELKRLIRSEL 892
Score = 27.3 bits (59), Expect = 0.004
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 68/268 (25%)
Query: 607 RPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGSPPGYVG 666
R K +L+G GVGKT V LA+++ G + T+ E + S + G+ Y G
Sbjct: 318 RKKNNPVLIGEPGVGKTAIVEGLAQRMVAG-EVPETLRDKRLVELNINSLVAGAK--YRG 374
Query: 667 YGE---GGVLTEAIRKMPYSVVLLDEVE----------KAHPEVLNIFYQGFDKGEIADG 713
E VL E ++ +DEV + +V N+F +GE+
Sbjct: 375 EFEERVQKVLKEIAEHQGELILFIDEVHTIVGAGQGGGEGGLDVANVFKPMMARGEL--- 431
Query: 714 EGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARMEVIPYLP 773
N++ T N YQ Y ++ A L+ P V+P
Sbjct: 432 --------NLIGATTLN-EYQ---KYIEQDAALERRFQP--------------VVVPEPT 465
Query: 774 LGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQ 833
+ + ++ I+RG L F+ + + EE++I A + + + +
Sbjct: 466 VAQTIM--ILRG----LRDTFEAHHKVSIT-EEAII-----------AAAELSDRYVSAR 507
Query: 834 LLPPVSLALLNKLAERAPVERIRLAAEA 861
LP ++ LL++ A R++L+A A
Sbjct: 508 FLPDKAIDLLDQAA-----ARVKLSATA 530