Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 878 a.a., Protein ClpV1 from Pseudomonas putida KT2440

 Score =  709 bits (1831), Expect = 0.0
 Identities = 400/872 (45%), Positives = 559/872 (64%), Gaps = 30/872 (3%)

Query: 4   IELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLE 63
           + L +L AKLN  S+ A E AA+LC+   H EV +E+ L  LLDN  SD+  +L+   + 
Sbjct: 14  VNLKSLFAKLNETSRTATESAAALCLSEHHYEVEVEHLLLQLLDNNDSDLAPILRHYQVV 73

Query: 64  VDQVKQAIASTYSREQVLDTY-PAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALT 122
            ++++  + +     +  +T  PA SP +  ++++AWLL+S E    ++RS  +  A L 
Sbjct: 74  AERLQAQLVTALGTFKKGNTRTPALSPHITRMIEQAWLLASIEYGVGQVRSAHLLQALLD 133

Query: 123 RAD-RYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPL----QAAAET 177
            A+ R +        E IN ++L+ + A ++  SAE+  A    + A P+    +A+ +T
Sbjct: 134 DAELRRVVIASAPELEKINADDLRLNLAALVEGSAESRQASPLASPAAPVSTSSKASGKT 193

Query: 178 P-LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEG 236
           P L ++  N+T+ AR G +DPVL RE E+  MVDIL RRR+NNPI+ GEAGVGK+A++EG
Sbjct: 194 PALDQYTVNLTQSAREGRIDPVLGREFEVRQMVDILTRRRQNNPILTGEAGVGKTAVVEG 253

Query: 237 LALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFID 296
           LALR+  G VP  L++V L++LDLG LQAGA VKGEFE RLK VI+ +K+S  PIILFID
Sbjct: 254 LALRIAQGDVPAVLKDVALHTLDLGLLQAGAGVKGEFENRLKAVIEEVKRSLHPIILFID 313

Query: 297 EAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKL 356
           EAHTLIGSG Q G +DAANLLKPALARGEL T+AATTW EYKKYFEKD AL RRFQ+VK+
Sbjct: 314 EAHTLIGSGGQAGQNDAANLLKPALARGELRTIAATTWAEYKKYFEKDAALARRFQVVKV 373

Query: 357 DEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTAC 416
           +EP  D+A+ +LRGL     + H V + D+AL  A  LS RYI+GRQLPDKA+ VLDTAC
Sbjct: 374 EEPDEDKAIHMLRGLLGKMREHHKVAVMDEALVQAVRLSNRYITGRQLPDKAVSVLDTAC 433

Query: 417 ARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEK 476
           ARIA+  ++ P  L          Q EID+L      G +  + RL+ L+    A++ ++
Sbjct: 434 ARIALAQSSLPGALEDCRRQIDNLQAEIDVLGHEAGKGHD-HARRLESLQAALQAEQQQE 492

Query: 477 AALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAER 536
             L   WQQ+  LVE + AL A       A + D   L  +R  L         +   + 
Sbjct: 493 QQLNAQWQQELELVEQLKALDA-------ANDADAQQLNTLRAELAR-------VQGDQP 538

Query: 537 LMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLL 596
           L+H  VD+  IA+VI+ WTG+P+ +M  DE+  +  L ++LG+ + GQ+ A+  I + + 
Sbjct: 539 LVHALVDSGAIAQVISGWTGIPLGKMLRDEIDTVQRLPALLGERVLGQDHALHEIGKRIK 598

Query: 597 TARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSR 656
            +RA +  P +P G FLL+GPSGVGKTET + LA+ LYGG++ L TINMSEYQE HTVS 
Sbjct: 599 ISRARMEDPNKPIGVFLLLGPSGVGKTETALALADTLYGGERNLITINMSEYQEAHTVSS 658

Query: 657 LIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGR 716
           L GSPPGYVGYGEGGVLTEA+R+ PYSVVLLDEVEKAHP+VL +F+Q FDKG + DGEGR
Sbjct: 659 LKGSPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVLELFFQVFDKGVLDDGEGR 718

Query: 717 VIDCQNIVFFLTSNLGYQTIVDYA------DEPAKLDEALYPELAAFFKPALLARMEVIP 770
            I+ +N V  LTSN G + I+           P  + E L  +L   FKPA L R+ ++P
Sbjct: 719 EINFRNTVIILTSNTGTERIMQTCLNATELPTPEAIVEDLRDQLNHVFKPAFLGRLSIVP 778

Query: 771 YLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAII 830
           + P+  ++L +IV  KL R+ K F   + AE+  +++L+  I +R T  ++GAR ++ I+
Sbjct: 779 FYPVQDQILERIVALKLERIAKRFARNHQAELSYDQALVKAIAARCTEVDSGARNIDNIL 838

Query: 831 EGQLLPPVSLALLNKLAERAPVERIRLAAEAG 862
              L+P ++  +L ++A+ AP++   LA E G
Sbjct: 839 SQTLMPELAQRVLERMAQDAPIQ--HLAIELG 868