Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 854 a.a., Chaperone protein ClpB from Pseudomonas putida KT2440

 Score =  516 bits (1329), Expect = e-150
 Identities = 310/848 (36%), Positives = 486/848 (57%), Gaps = 32/848 (3%)

Query: 10  IAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQ 69
           I +L ++ +LA+  A SL +   HP +   + L  LL+     ++ +L Q G +++ ++Q
Sbjct: 3   IDRLTSKLQLAISDAQSLAVGMDHPAIEPVHLLQALLEQQGGSIKPLLMQVGFDINGLRQ 62

Query: 70  AIASTYSREQVLDTYPA---FSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADR 126
            +     +   +         S  L  LL +A  L+  + +Q  + S  + LAA+   D 
Sbjct: 63  GLVKELDQLPKIQNPTGDVNMSQDLARLLNQADRLAQQKGDQF-ISSELVLLAAM---DE 118

Query: 127 YLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNV 186
                 + L +G++++ L+        ++     A  D NA    QA     L ++  ++
Sbjct: 119 NSKLGKLLLSQGVSKKALENAI-----NNLRGGAAVNDANAEESRQA-----LDKYTVDL 168

Query: 187 TEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKV 246
           T++A  G+LDPV+ R++E+   V +L RR KNNP+++GE GVGK+A+ EGLA R++ G+V
Sbjct: 169 TKRAEEGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIINGEV 228

Query: 247 PTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGN 306
           P  L+   L +LD+G L AGA  +GEFE+RLK +++ + +    IILFIDE HT++G+G 
Sbjct: 229 PDGLKGKRLLALDMGALIAGAKYRGEFEERLKSLLNELSKQEGQIILFIDELHTMVGAGK 288

Query: 307 QEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVD 366
            EG  DA N+LKPALARGEL  V ATT  EY+++ EKD AL RRFQ V ++EP+ +  + 
Sbjct: 289 GEGAMDAGNMLKPALARGELHCVGATTLNEYRQFIEKDAALERRFQKVLVEEPSEEDTIA 348

Query: 367 ILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTP 426
           ILRGL   YE  H V ITD A+ AAA+LS RYI+ RQLPDKAID++D A +RI + + + 
Sbjct: 349 ILRGLKERYEVHHKVAITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSK 408

Query: 427 PKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQ 486
           P+ L  L+    Q ++E   L++ +    E   +RL+ L  +    E E + L + W  +
Sbjct: 409 PEVLDRLDRRLIQLKVESQALKKEE---DEAAKKRLEKLTEEIERLEREYSDLEEIWASE 465

Query: 487 KSLVESIIALRAEL----MELSQAQEQDPDHLLV-----VRTALQEQYQALDAIDHAE-R 536
           K+ V+    ++ ++     EL  A+ +   + +      V   L+   Q +D     + +
Sbjct: 466 KAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKTDNQ 525

Query: 537 LMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLL 596
           L+  +V  ++IAEV++ WTG+PV +M   E  K+  +  +L Q + GQ  A+  +   + 
Sbjct: 526 LLRNKVTEEEIAEVVSKWTGIPVAKMLEGEREKLLKMEELLHQRVIGQSEAVTAVANAVR 585

Query: 597 TARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSR 656
            +RA L  P RP G+FL +GP+GVGKTE    LAE L+  ++ +  I+MSE+ EKH+V+R
Sbjct: 586 RSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDTEEAMVRIDMSEFMEKHSVAR 645

Query: 657 LIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGR 716
           LIG+PPGYVGY EGG LTEA+R+ PYSVVLLDEVEKAHP+V N+  Q  + G + D  GR
Sbjct: 646 LIGAPPGYVGYEEGGYLTEAVRRKPYSVVLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGR 705

Query: 717 VIDCQNIVFFLTSNLGYQTIVDYADEPAKLDEALYPELAAFFKPALLARM-EVIPYLPLG 775
            +D +N V  +TSNLG   I +   +      A+   + A F+P  + R+ EV+ + PLG
Sbjct: 706 TVDFRNTVIVMTSNLGSAQIQELVGDREAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLG 765

Query: 776 KEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLL 835
           +E +A I   +L RL      R    + +    +D++++       GAR L+  I+  + 
Sbjct: 766 REQIAGITEIQLGRLRSRLLER-ELSLSLSPEALDKLIAVGYDPVYGARPLKRAIQRWIE 824

Query: 836 PPVSLALL 843
            P++  +L
Sbjct: 825 NPLAQLIL 832