Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 863 a.a., ATP-dependent chaperone ClpB from Magnetospirillum magneticum AMB-1

 Score =  481 bits (1239), Expect = e-140
 Identities = 300/846 (35%), Positives = 465/846 (54%), Gaps = 31/846 (3%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           K   + K  ++ A +L +   H  +T E+   VLL +       +++ AG +  +  + +
Sbjct: 5   KFTERCKGFIQSAQTLALRSGHQRLTPEHLAQVLLADKEGLAANLIRAAGGDPVRALKGV 64

Query: 72  ASTYSREQVLDTYPA----FSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRY 127
            +   +   ++   A     +P L  LL +A  L+    +     +    L ALT A   
Sbjct: 65  ETELGKLPKVEGPGAGGVHLAPELARLLDQAVQLADKAGDS--FVTAERLLLALTLATGT 122

Query: 128 LSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVT 187
            + K+++   G+  + L      +       + +  D   A          L ++  ++T
Sbjct: 123 STAKVLAE-AGVTPQGLNHAIEDVRKGRKANSASAEDSYDA----------LKKYARDLT 171

Query: 188 EQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVP 247
           + AR+G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLA+R++ G VP
Sbjct: 172 QAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAIRIINGDVP 231

Query: 248 TQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQ 307
             L+N  L  LDLG L AGA  +GEFE+RLK V+  +  +   ++LFIDE HTLIG+G  
Sbjct: 232 ETLKNKRLMVLDLGALVAGAKFRGEFEERLKAVLTEVTAANGEVVLFIDEMHTLIGAGAA 291

Query: 308 EGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDI 367
           EG  DA+NLLKPALARGEL  + ATT  EY+K+ EKD AL RRFQ V + EP ++  V I
Sbjct: 292 EGSMDASNLLKPALARGELHCIGATTLNEYRKHVEKDAALARRFQPVFVSEPGVEDTVSI 351

Query: 368 LRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPP 427
           LRGL   YE  H V I D AL +AA LS RYI+ R LPDKAID++D A +R+ + + + P
Sbjct: 352 LRGLKEKYELHHGVRIADGALVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKP 411

Query: 428 KRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQK 487
           + L  L+    Q ++E + L +    G      +L+V  NQ    E E   +++ W+ +K
Sbjct: 412 EALDELDRRIVQLKIEREALRKESDAGSRDRLGKLEVELNQL---ERESFDMSERWRAEK 468

Query: 488 S-------LVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAIDHAERLMHP 540
           S       + E +   R EL    +A        L        + +     D   R++  
Sbjct: 469 SQLADSTKVKEQLEEARIELANAERASNWARAGELKFGVIPDLEKRIEGGGDSGSRMLTE 528

Query: 541 QVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTARA 600
            V  + IA V++ WTG+PV++M   E  K+  + S L   + GQ  A+  +   +  ARA
Sbjct: 529 SVTEEHIASVVSRWTGIPVEKMLQGERDKLLGMESRLKTRVVGQSEALVAVSNAVRRARA 588

Query: 601 DLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIGS 660
            L+ P RP G+FL +GP+GVGKTE    LAE ++  +  +  ++MSEY EKH+V+RLIG+
Sbjct: 589 GLQDPNRPIGSFLFLGPTGVGKTELTKALAEFMFDDETAMVRMDMSEYMEKHSVARLIGA 648

Query: 661 PPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVIDC 720
           PPGYVGY EGG LTEA+R+ PY V+L DEVEKAHP+V N+  Q  D G + DG+GR +D 
Sbjct: 649 PPGYVGYEEGGALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDF 708

Query: 721 QNIVFFLTSNLGYQTIVDYAD--EPAKLDEALYPELAAFFKPALLARM-EVIPYLPLGKE 777
           +N +  LTSNLG + + +  +  + A++   +   + A F+P  L R+ E++ +  LG+ 
Sbjct: 709 RNTLIVLTSNLGSEILANQEEGHDSAEVRAEVMEVVRASFRPEFLNRLDEILLFHRLGRG 768

Query: 778 VLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLLPP 837
            ++ IV  +L RL  L   R    + ++   ++ +  +      GAR L+ +I+  L  P
Sbjct: 769 DMSGIVDIQLKRLRALLADR-KITLSLDAGAMEWLAEKGYDPAYGARPLKRVIQRALQNP 827

Query: 838 VSLALL 843
           ++  +L
Sbjct: 828 LAGLIL 833