Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., ATP-dependent chaperone ClpB from Enterobacter asburiae PDN3

 Score =  511 bits (1315), Expect = e-149
 Identities = 332/875 (37%), Positives = 494/875 (56%), Gaps = 58/875 (6%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           +L  + +LAL  A SL +   +  +   + +  LL+     VR +L  AG+   Q++ AI
Sbjct: 5   RLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSVRPLLTSAGINAGQLRTAI 64

Query: 72  ASTYSR-EQVLDTYPAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYLSF 130
               SR  QV  T     P             S +L +A      +   A  R D ++S 
Sbjct: 65  DQALSRLPQVEGTGGDVQP-------------SQDLVRALNLCDKL---AQKRGDNFISS 108

Query: 131 KLISLFEGINRENLKKHFAMILSDSAETA------------VAKTDKNAANPLQAAAETP 178
           +L  L    +R  L     ++ S  A TA             +  D+ A +  QA     
Sbjct: 109 ELFVLAALESRGTLTD---LLKSAGATTANVTQAIEKMRGGESVNDQGAEDQRQA----- 160

Query: 179 LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLA 238
           L +F  ++TE+A  G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLA
Sbjct: 161 LKKFTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLA 220

Query: 239 LRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEA 298
            R+V G+VP  L+   + +LD+G L AGA  +GEFE+RLKGV++ + +    +ILFIDE 
Sbjct: 221 QRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDEL 280

Query: 299 HTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDE 358
           HT++G+G  +G  DA N+LKPALARGEL  V ATT  EY++Y EKD AL RRFQ V + E
Sbjct: 281 HTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAE 340

Query: 359 PTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACAR 418
           P+++  + ILRGL   YE  H+V ITD A+ AAA LS RYI+ RQLPDKAID++D A + 
Sbjct: 341 PSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASS 400

Query: 419 IAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELAD-EAEKA 477
           I + + + P+ L  L+    Q +LE   L++      E   +RLD+L N+EL D E + +
Sbjct: 401 IRMQIDSKPEELDRLDRRIIQLKLEQQALKKE---SDEASKKRLDML-NEELDDKERQYS 456

Query: 478 ALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTA---------LQEQYQ-A 527
            L + W+ +K+ +     ++AEL +   A EQ      + R +         L++Q + A
Sbjct: 457 ELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEIA 516

Query: 528 LDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETA 587
           + +     RL+  +V   +IAEV+A WTG+PV +M   E  K+  +   L   + GQ  A
Sbjct: 517 MQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRMEQDLHNRVIGQNEA 576

Query: 588 IERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSE 647
           +E +   +  +RA L  P RP G+FL +GP+GVGKTE    LA  ++     +  I+MSE
Sbjct: 577 VEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSE 636

Query: 648 YQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDK 707
           + EKH+VSRL+G+PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V NI  Q  D 
Sbjct: 637 FMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDD 696

Query: 708 GEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADE--PAKLDEALYPELAAFFKPALLAR 765
           G + DG+GR +D +N V  +TSNLG   I +   E     + + +   ++  F+P  + R
Sbjct: 697 GRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGHMKDLVLGVVSHNFRPEFINR 756

Query: 766 M-EVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGAR 824
           + EV+ + PLG++ +A I + +L RL K  + R   E+ I +  +  +         GAR
Sbjct: 757 IDEVVVFHPLGEKHIASIAQIQLQRLYKRLEER-GYEIHISDEALKLLSENGYDPVYGAR 815

Query: 825 MLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAA 859
            L+  I+ Q+  P++  +L+   E  P + IRL A
Sbjct: 816 PLKRAIQQQIENPLAQQILS--GELIPGKVIRLEA 848