Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 857 a.a., ATP-dependent chaperone ClpB from Dickeya dianthicola ME23

 Score =  507 bits (1305), Expect = e-147
 Identities = 319/849 (37%), Positives = 482/849 (56%), Gaps = 34/849 (4%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           +L  + +LAL  A SL + R H  +   + +  LL+     V  +L   G  V ++K  I
Sbjct: 5   RLTNKFQLALADAQSLALGRDHQFIEPLHLMSALLNQEGGTVGPLLTATGANVSRLKSEI 64

Query: 72  ASTYSR-EQVLDTYPAFSPLLVELLQEAWLLSSTELEQAE-LRSGAIFLAALTRADRYLS 129
                R  QV  T     P   EL++   +      ++ +   S  +F+ A+  +   L 
Sbjct: 65  GQAIGRLPQVEGTGGDVQPSS-ELVRTLNICDKLAQKKGDTFISSELFVLAVFESRSALG 123

Query: 130 FKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCTNVTEQ 189
             L +   G  ++N+ +    +         +  D+  A          L +F  ++TE+
Sbjct: 124 DLLKNA--GATQQNVTQAIEQVRGGQQVNEQSAEDQRQA----------LKKFTIDLTER 171

Query: 190 ARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQ 249
           A  G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLA R+V G+VP  
Sbjct: 172 AEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEG 231

Query: 250 LQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEG 309
           L+N  + +LD+G L AGA  +GEFE+RLKGV++ + +    +ILFIDE HT++G+G  +G
Sbjct: 232 LKNKRVLALDMGALVAGAKYRGEFEERLKGVLNDLSKQEGNVILFIDELHTMVGAGKADG 291

Query: 310 GSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILR 369
             DA N+LKPALARGEL  V ATT  EY++Y EKD AL RRFQ V + EPT++  + ILR
Sbjct: 292 AMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPTVEDTIAILR 351

Query: 370 GLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKR 429
           GL   YE  H+V ITD A+ AAA LS RYIS R+LPDKAID++D A + I + + + P+ 
Sbjct: 352 GLKERYELHHHVQITDPAIVAAAMLSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEP 411

Query: 430 LALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQQKSL 489
           L  L+    Q +LE   L++      E   +RL++L  +    E E + L + W+ +K+ 
Sbjct: 412 LDRLDRRIIQLKLEQQALKKE---SDEASLKRLEILNAELEQKEREYSKLEEEWKAEKAS 468

Query: 490 VESIIALRAEL----MELSQAQEQ-DPDHLLVVR----TALQEQYQALDAID-HAERLMH 539
           +     ++A L    + L QA+ Q D   +  ++      L++Q  A   ++    RL+ 
Sbjct: 469 LTGTQNIKAALEQAKISLEQARRQGDLGQMSELQYGKIPELEKQLAAATQVEGKTMRLLR 528

Query: 540 PQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTAR 599
            +V   +IAEV+A WTG+PV +M   E  K+  +   L Q + GQ  A+E +   +  +R
Sbjct: 529 NRVTDAEIAEVLARWTGIPVSRMLESEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSR 588

Query: 600 ADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLIG 659
           A L  P RP G+FL +GP+GVGKTE    LA  L+     +  I+MSE+ EKH+VSRL+G
Sbjct: 589 AGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVG 648

Query: 660 SPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVID 719
           +PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V NI  Q  D G + DG+GR +D
Sbjct: 649 APPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVD 708

Query: 720 CQNIVFFLTSNLGYQTIVDYADEP--AKLDEALYPELAAFFKPALLARM-EVIPYLPLGK 776
            +N V  +TSNLG   I +   E    ++ + +   ++  F+P  + R+ EV+ + PLGK
Sbjct: 709 FRNTVVIMTSNLGSDLIQERFGEMNYNQMRDMVLSVVSHHFRPEFINRIDEVVVFHPLGK 768

Query: 777 EVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSE-NGARMLEAIIEGQLL 835
             +  I + +L RL K  + R     V + +L  E+L R+      GAR L+  I+  + 
Sbjct: 769 SHITSIAQIQLQRLYKRMEERGYTVTVSDAAL--ELLGRSGFDPVYGARPLKRAIQQMIE 826

Query: 836 PPVSLALLN 844
            P++  +L+
Sbjct: 827 NPLAQQILS 835