Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 883 a.a., Protein ClpV1 from Azospirillum sp. SherDot2

 Score =  607 bits (1564), Expect = e-177
 Identities = 366/887 (41%), Positives = 524/887 (59%), Gaps = 53/887 (5%)

Query: 5   ELPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEV 64
           ++ TLI KL+   +  LE+AA+LC+   H +V +E+ L  +L      V  +L+   ++ 
Sbjct: 4   DIKTLIGKLDRDGRKVLERAAALCVSNTHYDVEVEHLLLSVLRANSGVVAGILRHYNVDA 63

Query: 65  DQVKQAIASTYSREQVLDTY-PAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTR 123
            +V+  + +   + +  +T  PAFSP + ELL+ A L S T L+  ++   A+  AA+  
Sbjct: 64  ARVEAELNAALEKIRRGNTRTPAFSPRVPELLENALLTSVTHLDSPQILVPALLWAAVA- 122

Query: 124 ADRYLSF------KLISLFEGINRENLKKHFAMILSDS--AETAVAKTDKNAANPLQAAA 175
            D   +        L+++       +L +   M+ SD+   E + A   +  A PL  A+
Sbjct: 123 CDSVRAVVGESAPSLLAIPRDRTATDLPELVRMLRSDTKLGEASPAAAGQIGA-PLGEAS 181

Query: 176 ETP---------LGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEA 226
            TP         L ++  ++T QAR G++DPV+ R+ E+  +VD++ RRR+NNPI+VG+ 
Sbjct: 182 STPSPLASGQSMLDQYTVDLTAQARAGKIDPVIGRDREIRQVVDVMMRRRQNNPILVGDP 241

Query: 227 GVGKSAMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQ 286
           GVGK+A++EGLALR+  G VPT L+   + +LDLG LQAGA VKGEFE RLK +I  +  
Sbjct: 242 GVGKTAIVEGLALRIAEGDVPTPLRGTAIRTLDLGLLQAGAGVKGEFENRLKSIIKEVAA 301

Query: 287 SPKPIILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPA 346
           S  P ++FIDEAH LIG+G   G  DAANLLKPALARGE  T+AATTW EYKKYFEKDPA
Sbjct: 302 SAVPTVVFIDEAHALIGAGGAAGQGDAANLLKPALARGEFRTIAATTWAEYKKYFEKDPA 361

Query: 347 LTRRFQLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPD 406
           L RRFQ V + EP    A  +LRGL   +E+ H V + DD + AA +LSARYI  RQLPD
Sbjct: 362 LARRFQPVSVPEPDEAAAAAMLRGLVRRFEEHHGVRVLDDGIAAAVKLSARYIPARQLPD 421

Query: 407 KAIDVLDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLR 466
           KAI VLDTACAR+A+  T+ P+ +  LE        E + LER      E    RL  + 
Sbjct: 422 KAISVLDTACARVAVARTSKPEAVETLEREDQMLAREAERLEREAGATHEA---RLAGIA 478

Query: 467 NQELADEAEKAALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQ 526
            +  A   E AALT  W ++  LV++I         L+  ++ D         A +E+  
Sbjct: 479 ARRRAVAEELAALTGRWNREAELVKAIDE------ALTAGRQAD-------AVAAEERLA 525

Query: 527 ALDAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQET 586
           AL   D    L+  +VD   +A V+++WTG+PV  M+ D++  +  L   +   + GQ  
Sbjct: 526 ALRGDD---ALVPHRVDGGVVAAVVSNWTGIPVGSMSKDDVDVVVGLEERMEARVVGQPQ 582

Query: 587 AIERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMS 646
           A+  I R +   RA L  P RP G FLL GPSGVGKTET + LAE L GG+Q L TINMS
Sbjct: 583 ALRAIARAVRGYRAGLNEPNRPIGVFLLSGPSGVGKTETSLALAELLNGGEQSLITINMS 642

Query: 647 EYQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFD 706
           EYQE H V+ L G+PPGYVGYG GGVLTEA+R+ P+SV+L+DEVEKAHP+VL++FYQ FD
Sbjct: 643 EYQESHAVATLRGAPPGYVGYGSGGVLTEAVRRRPHSVILMDEVEKAHPDVLDMFYQVFD 702

Query: 707 KGEIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPAKLD------------EALYPEL 754
           KG + DGEG  +D +N +  LTSNLG   + +     A+LD            EA+   L
Sbjct: 703 KGVLEDGEGVEVDFRNTLILLTSNLGDVELTELG--RARLDAGEIREALEEGVEAISDPL 760

Query: 755 AAFFKPALLARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILS 814
              F+P+ L R+ V+PY PL +  +  I   K+ +L K  +    A + +  + +D ++ 
Sbjct: 761 RRRFRPSFLGRLTVVPYYPLSERQVRAIAMMKVDKLRKRTEGNRAAALTVAPAALDALVR 820

Query: 815 RATRSENGARMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAAEA 861
           RA  S+ GARM++ ++   ++P V++ +L+++A   PV  IR+  ++
Sbjct: 821 RAVHSDAGARMIDTLLSEFVVPEVAMRILDQVAAGQPVGAIRVDCDS 867