Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 867 a.a., Chaperone protein ClpB from Azospirillum sp. SherDot2

 Score =  513 bits (1322), Expect = e-149
 Identities = 319/848 (37%), Positives = 482/848 (56%), Gaps = 42/848 (4%)

Query: 16  QSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAIASTY 75
           +S+  ++ A +L + R H  +T E+ L  LLD+       +++ AG +      A+ +  
Sbjct: 9   RSRGFIQAAQTLAVRRGHQRLTPEHLLKTLLDDKEGLAANLIRAAGGDPKAALSAVDAEL 68

Query: 76  SREQVLDTYPAFSPLLVELLQEAWLLSSTELEQA--ELRSGAIFLAALTRADRYLSFKLI 133
            +   ++   A    L   L   +  +    E+A     +    L AL  AD   S K +
Sbjct: 69  DKLPKVEGSGAGQLYLTPELSRVFEQAEKVAEKAGDSFVTAERILLALAMADGTPSGKAL 128

Query: 134 SLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAE--TPLGRFCTNVTEQAR 191
                          A +   +  TA+    K       +A +    L ++  ++T  AR
Sbjct: 129 KS-------------AGVTPQALNTAINDIRKGRTADSASAEQGYDALKKYARDLTAAAR 175

Query: 192 NGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGKVPTQLQ 251
           +G+LDPV+ R+ E+   + +L RR KNNP+++GE GVGK+A++EGLA R+V G VP  L+
Sbjct: 176 DGKLDPVIGRDEEIRRTIQVLARRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLK 235

Query: 252 NVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSGNQEGGS 311
           N +L SLDLG L AGA  +GEFE+RLK V+  I+ +   I++FIDE HTL+G+G  +G  
Sbjct: 236 NKQLLSLDLGALVAGAKYRGEFEERLKAVLSEIQAAAGEIVVFIDELHTLVGAGKSDGAM 295

Query: 312 DAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAVDILRGL 371
           DA+N+LKPALARGEL  V ATT  E++KY EKD AL RRFQ V + EPT++  + ILRGL
Sbjct: 296 DASNMLKPALARGELHCVGATTLDEFRKYIEKDAALARRFQPVFVSEPTVEDTISILRGL 355

Query: 372 NSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTTPPKRLA 431
              YE  H V ITD A+ +AA LS RYI+ R LPDKAID++D A +R+ + + + P+ + 
Sbjct: 356 KERYEVHHGVRITDSAIVSAATLSNRYITDRFLPDKAIDLIDEAASRLRMAVDSKPEAID 415

Query: 432 LLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRN--QELAD-EAEKAALTQSWQQQKS 488
            L+    Q ++E + L+R Q      DS   D L N  +EL+D E E A LT  WQ +K 
Sbjct: 416 ELDRRIIQLKIEREALKREQ------DSASRDRLVNLERELSDLEQESAELTAKWQAEKD 469

Query: 489 LVESIIALRAEL----MELSQAQE-----QDPDHLLVVRTALQEQYQALDAIDHA-ERLM 538
            ++    ++ +L     EL  AQ      +  +    V   L++  +  DA +HA  R++
Sbjct: 470 QLQGAQKIKEDLEKARTELETAQRDGNWGRAGELAYGVIPGLEKALK--DAEEHASSRML 527

Query: 539 HPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRHLLTA 598
           + +V    IA V++ WTGVPVD+M   E  K+  +   L   + GQ+ AI  +   +  A
Sbjct: 528 NEEVRDSDIAAVVSRWTGVPVDKMLAGEREKLLAMEDKLRGRVIGQDEAIVAVSNAVRRA 587

Query: 599 RADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTVSRLI 658
           RA L+ P RP G+FL +GP+GVGKTE    LAE L+  +  +  ++MSEY EKH+V+R+I
Sbjct: 588 RAGLQDPNRPIGSFLFLGPTGVGKTELTKALAEFLFDDETAMVRLDMSEYMEKHSVARMI 647

Query: 659 GSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGEGRVI 718
           G+PPGYVGY EGG LTEA+R+ PY VVL DEVEKAHP+V N+  Q  D G + DG+GR +
Sbjct: 648 GAPPGYVGYEEGGALTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTV 707

Query: 719 DCQNIVFFLTSNLGYQTIVDYA--DEPAKLDEALYPELAAFFKPALLARM-EVIPYLPLG 775
           D +N+V  +TSNLG Q + + A  ++ A + + +   + A F+P  L R+ E++ +  L 
Sbjct: 708 DFRNVVIIMTSNLGSQALAEQAEGEDSAAVRDEVMEAVRAHFRPEFLNRLDEILLFHRLD 767

Query: 776 KEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIEGQLL 835
           +  +  IV+ +L RL K+   R    + ++E+    +         GAR L+ +I+ +L 
Sbjct: 768 RRHMGGIVKIQLGRLTKMLADR-EITLTVDEAATQWLADAGYDPVYGARPLKRVIQRELQ 826

Query: 836 PPVSLALL 843
            P++  +L
Sbjct: 827 NPMATLIL 834