Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 858 a.a., Heat shock protein F84.1 from Alteromonas macleodii MIT1002

 Score =  514 bits (1323), Expect = e-149
 Identities = 319/882 (36%), Positives = 502/882 (56%), Gaps = 59/882 (6%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           +  ++ +LA+  A SL + R H  +   + +  +L+     VR +L QA + V+ ++ A+
Sbjct: 5   RFTSKFQLAISDAQSLALGRDHQYIEPVHLMTAMLNQQGGSVRPLLDQANINVNALRSAL 64

Query: 72  ASTYSREQVLDTYPAFSPLL--VELLQEAWLLSS-----TELEQAELRSGAIFLAALTRA 124
           +      Q ++  P    +   V+L +++ +L +      +  + E  +  IF+ A  + 
Sbjct: 65  S------QAIERLPRIEGIGGDVQLSKDSGILLNLCDKIAQQRKDEYITSEIFVLAALQD 118

Query: 125 DRYLSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAETPLGRFCT 184
              L   L SL       N+ K       D        TD NA +  QA     L ++ T
Sbjct: 119 KGRLGEILKSL-------NITKEAIESAIDDMRGGQKVTDPNAEDVRQA-----LEKYTT 166

Query: 185 NVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAG 244
           ++TE+A  G+LDPV+ R++E+   V +L RR KNNP+++GE GVGK+A++EGLA R++ G
Sbjct: 167 DLTERAEQGKLDPVIGRDDEIRRTVQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIING 226

Query: 245 KVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGS 304
           +VP  L+N  + +LD+G L AGA  +GEFE+RLK V++ + +    +ILF+DE HT++G+
Sbjct: 227 EVPEGLKNKRVLALDMGALVAGAKYRGEFEERLKAVLNELAKEEGRVILFVDELHTMVGA 286

Query: 305 GNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQA 364
           G  +G  DA N+LKPALARGEL  V ATT  EY++Y EKD AL RRFQ V ++EP+++  
Sbjct: 287 GKGDGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVEEPSVEDT 346

Query: 365 VDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMT 424
           + ILRGL   YE  H+V ITD A+ AAA LS RYIS RQLPDKAID++D A + I + + 
Sbjct: 347 IAILRGLKERYELHHSVDITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASSIRLQID 406

Query: 425 TPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDS---ERLDVLRNQELADEAEKAALTQ 481
           + P+ +  LE    Q +LE       Q L +E D    +RL+++  +    E + A L +
Sbjct: 407 SKPEEMDRLERRIIQLKLE------EQALAKETDDASHKRLEMIELEREQAETKYAELEK 460

Query: 482 SWQQQKSLVESIIALRAEL-------------MELSQAQEQDPDHLLVVRTALQEQYQAL 528
            W  +K  ++   +++ EL              +L++  E     +  +   L+   QA 
Sbjct: 461 VWLDEKDAMQGTQSIKGELEQAKLDLEIARRASDLNRMSELQYGRIPELEAKLE---QAA 517

Query: 529 DAIDHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAI 588
           +       L+  +V   +IA+V++ WTG+PV +M   E  K+  +  +L + + GQE A+
Sbjct: 518 ENETRETTLLKNKVTDVEIADVLSRWTGIPVARMLEGEREKLLRMEDVLHKRVVGQEEAV 577

Query: 589 ERIHRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEY 648
           E +   +  +RA L  P RP G+FL +GP+GVGKTE    LA  ++  +  +  I+MSE+
Sbjct: 578 EAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAGFMFDTEDAMVRIDMSEF 637

Query: 649 QEKHTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKG 708
            EKH+V+RL+G+PPGYVGY EGG LTEA+R+ PYSV+LLDEVEKAHP+V NI  Q  D G
Sbjct: 638 MEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDG 697

Query: 709 EIADGEGRVIDCQNIVFFLTSNLGYQTIVDYADEPA--KLDEALYPELAAFFKPALLARM 766
            + DG+GR +D +N V  +TSNLG   I D  +E     +  ++   +   F+P  + R+
Sbjct: 698 RLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQYDDMKASVMSVVGQHFRPEFINRV 757

Query: 767 -EVIPYLPLGKEVLAQIVRGKLARLE-KLFKTRYNAEVVIEESLIDEILSRATRSENGAR 824
            +++ + PLGKE +  I + +LA L  +L +  Y  ++ +  + +D++         GAR
Sbjct: 758 DDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGY--KLTLSAAAMDKLADAGFDPVFGAR 815

Query: 825 MLEAIIEGQLLPPVSLALLNKLAERAPVERIRL-AAEAGEFI 865
            L+  I+ Q+  P++  LL    E  P   IR+ A ++G F+
Sbjct: 816 PLKRAIQVQVENPLAHQLL--AGELIPESTIRIDADDSGLFV 855