Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 859 a.a., Chaperone protein ClpB from Acinetobacter radioresistens SK82

 Score =  498 bits (1282), Expect = e-145
 Identities = 307/843 (36%), Positives = 490/843 (58%), Gaps = 44/843 (5%)

Query: 12  KLNAQSKLALEQAASLCIERQHPEVTLEYYLDVLLDNPLSDVRLVLKQAGLEVDQVKQAI 71
           K   + + AL  A SL + + H  +   + L  L++ P S++ L L+QAG  + +++Q +
Sbjct: 5   KFTNRLQQALSDAQSLAMGKDHTAIDSIHILATLIEEP-SNLSL-LQQAGANLRELQQRL 62

Query: 72  ASTYSREQVLDTYPA---FSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTRADRYL 128
              ++   VL         +P  V++L  A        ++   ++G  F++         
Sbjct: 63  EKAFNDAPVLSNPTGDINLNPDAVKILNLA--------DRYAQKAGDEFIST-------- 106

Query: 129 SFKLISLFEGINRENLKKHFAMILSDSAETAVAK---TDKNAANPLQAAAETPLGRFCTN 185
            + +++L E  N + +      + +++    + K   ++K  +N  +   ++ L ++  N
Sbjct: 107 DWVMLALAESGNSKTILNGVG-VTAETLRPVIEKIRGSEKVMSNNHEEQRDS-LNKYTIN 164

Query: 186 VTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKSAMIEGLALRVVAGK 245
           +TE+A  G+LDPV+ R++E+   + +L RR KNNP+++GE GVGK+A++EGLA R+V G+
Sbjct: 165 LTERALAGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGE 224

Query: 246 VPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPIILFIDEAHTLIGSG 305
           VP  L++ ++ SLDLG L AGA  +GEFE+RLK V++ + +    +ILFIDE HTL+G+G
Sbjct: 225 VPESLKDKQVLSLDLGSLLAGAKYRGEFEERLKAVLNDLAKQEGRVILFIDELHTLVGAG 284

Query: 306 NQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRFQLVKLDEPTIDQAV 365
             +G  DA N+LKPALARGEL  V ATT  EY++Y EKD AL RRFQ V +DEP+++  +
Sbjct: 285 KTDGAMDAGNMLKPALARGELRCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTI 344

Query: 366 DILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDVLDTACARIAINMTT 425
            ILRGL   YE  H V I D A+ AAA++S RYI+ RQLPDKAID++D A +RI + + +
Sbjct: 345 AILRGLKERYEVHHGVKILDSAIIAAAKMSHRYITDRQLPDKAIDLIDEAASRIKMELDS 404

Query: 426 PPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELADEAEKAALTQSWQQ 485
            P+ L  L+    Q +++++ +++ +  G +     ++ L  Q    + E   L + W+ 
Sbjct: 405 KPEALDKLDRRLIQLKMQLEAVKKDEDAGSK---SEVNYLEKQIEEVQKEYNDLEEVWKA 461

Query: 486 QKSLVESIIALRAEL----MELSQAQEQ----DPDHLLV-VRTALQEQYQALDAI-DHAE 535
           +K+LVE     + EL    + L +AQ +    +   L   V   LQ+Q +  + I DH E
Sbjct: 462 EKTLVEGTKKAQVELDQARVALEKAQREGDWAEASRLQYGVIPELQKQLEQDEVIEDHEE 521

Query: 536 -RLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERIHRH 594
            +L+  +V  ++IAEV++  TG+PV +M   E  K+ H+   L   + GQ+ A+  +   
Sbjct: 522 PKLLRNKVTDNEIAEVVSAATGIPVAKMLQGEREKLLHMEEFLHNRVVGQDEAVIAVSNA 581

Query: 595 LLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEKHTV 654
           +  +RA L  P RP G+FL +GP+GVGKTE    LA  L+     +  I+MSE+ EKH+V
Sbjct: 582 VRRSRAGLSDPNRPSGSFLFLGPTGVGKTELTKALANFLFDSDDAMIRIDMSEFMEKHSV 641

Query: 655 SRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIADGE 714
           SRL+G+PPGYVGY EGGVLTEA+R+ PYSV+L DEVEKAHP+V NI  Q  D G + D +
Sbjct: 642 SRLVGAPPGYVGYEEGGVLTEAVRRKPYSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQ 701

Query: 715 GRVIDCQNIVFFLTSNLGYQTIVDYAD--EPAKLDEALYPELAAFFKPALLARM-EVIPY 771
           GRVID +N V  +TSNLG Q + +  +     ++   +   ++  F+P  + R+ E++ +
Sbjct: 702 GRVIDFKNTVIVMTSNLGSQDVRELGEGASDEEMRSVVMSAVSHHFRPEFINRIDELVIF 761

Query: 772 LPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGARMLEAIIE 831
             L K  +  I   +L RL      R +  + I+++  D ++        GAR L+  I+
Sbjct: 762 HSLKKSQIRGIADIQLERLRSRLAER-DMSLTIDDTAFDLLIDAGFDPVYGARPLKRAIQ 820

Query: 832 GQL 834
            Q+
Sbjct: 821 SQV 823