Pairwise Alignments

Query, 869 a.a., type VI secretion system ATPase TssH from Vibrio cholerae E7946 ATCC 55056

Subject, 895 a.a., Protein ClpV1 from Acinetobacter radioresistens SK82

 Score =  682 bits (1761), Expect = 0.0
 Identities = 384/882 (43%), Positives = 553/882 (62%), Gaps = 34/882 (3%)

Query: 6   LPTLIAKLNAQSKLALEQAASLCIERQHPEVTLEY-YLDVLLDNPLSDVRLVLKQAGLEV 64
           L  LI KL+  ++ ALE++A+ CI+ Q+ E+ +E+ ++++L     +D++L+L++  +  
Sbjct: 4   LKILITKLSFPTRTALEKSANFCIKLQNYEIEIEHLFIELLNQEVPNDIQLLLEKYNISN 63

Query: 65  DQVKQAIASTYSREQVLDTY-PAFSPLLVELLQEAWLLSSTELEQAELRSGAIFLAALTR 123
           D +   +  T       +T  P F+  ++ L ++AWL++S + +   +RSG + +A LT 
Sbjct: 64  DNLINDLKETICSLPKGNTRTPIFAKSIIRLFEQAWLIASAD-QIPVIRSGHLLVALLTA 122

Query: 124 ADRY-LSFKLISLFEGINRENLKKHFAMILSDSAETAVAKTDKNAANPLQAAAET----- 177
            D Y ++ +  SLF+ +  +++K  F  + + S E  V ++     N L    ET     
Sbjct: 123 PDLYQIATRASSLFDLLPIDSMKHKFLEVCTSSTEHKVERSCSTEQNHLHTQQETIPSIS 182

Query: 178 ------PLGRFCTNVTEQARNGELDPVLSRENELNLMVDILCRRRKNNPIVVGEAGVGKS 231
                  L ++  N++ +A  G++DPV+ RE+E+ LM+DIL RRR+NNPI+ GE GVGK+
Sbjct: 183 PAIKTPALDQYTINLSVKAETGKIDPVIGREHEIRLMLDILLRRRQNNPILTGEPGVGKT 242

Query: 232 AMIEGLALRVVAGKVPTQLQNVELYSLDLGRLQAGASVKGEFEKRLKGVIDAIKQSPKPI 291
           A++EGLAL++  G VP  L+NV+L+ LD+G LQAGASVKGEFE RLK VI  ++ SP PI
Sbjct: 243 AVVEGLALKISQGLVPEALRNVQLHVLDMGLLQAGASVKGEFENRLKQVIQEVQASPHPI 302

Query: 292 ILFIDEAHTLIGSGNQEGGSDAANLLKPALARGELSTVAATTWKEYKKYFEKDPALTRRF 351
           ILFIDEAHTLIG+G Q G +DAANLLKPALARGEL T+AATTW EYK+YFEKD AL+RRF
Sbjct: 303 ILFIDEAHTLIGAGGQAGQNDAANLLKPALARGELRTIAATTWAEYKQYFEKDAALSRRF 362

Query: 352 QLVKLDEPTIDQAVDILRGLNSVYEKAHNVLITDDALKAAAELSARYISGRQLPDKAIDV 411
           Q+VK++EP+ + A+D+LR +  V +   N+ I D A+  A + S RYISGRQLPDKAI V
Sbjct: 363 QVVKVEEPSEEVAIDMLRAMIPVMQAHFNLQIDDQAIITAVQASHRYISGRQLPDKAISV 422

Query: 412 LDTACARIAINMTTPPKRLALLETLCHQRQLEIDMLERAQFLGQEVDSERLDVLRNQELA 471
           LDTA AR+A+     P +L  L+   H   LE  +L+  +     +  ERLD L    + 
Sbjct: 423 LDTAAARVALTHNAQPVKLDQLKAQLHNLTLEQQILQN-EHRQIPIHHERLDELEQCLVR 481

Query: 472 DEAEKAALTQSWQQQKSLVESIIALRAELMELSQAQEQDPDHLLVVRTALQEQYQALDAI 531
            + E       WQ +  LV++I  L+          +QD D    V+  +      L+A+
Sbjct: 482 LQQEIQETEDQWQAELKLVKNIQRLK----------QQDTDEQTAVQNEITRLRADLNAL 531

Query: 532 DHAERLMHPQVDADQIAEVIADWTGVPVDQMNTDELHKITHLTSILGQAIKGQETAIERI 591
              + L+  +V+A  I E+I+DWTG+PV  M  DE+ +I  L + L Q + GQ  A+E++
Sbjct: 532 QGQQPLVFERVNAQIINEIISDWTGIPVGNMINDEIKQILTLENKLAQRVMGQSCALEQL 591

Query: 592 HRHLLTARADLRRPGRPKGAFLLVGPSGVGKTETVVQLAEQLYGGKQFLTTINMSEYQEK 651
            + + T++A L  P +P+G FLL+GPSGVGKTET + LA +LYGG+Q L TINMSEYQE 
Sbjct: 592 VQGIKTSKAKLEDPNKPQGVFLLIGPSGVGKTETALALAHELYGGEQHLITINMSEYQEA 651

Query: 652 HTVSRLIGSPPGYVGYGEGGVLTEAIRKMPYSVVLLDEVEKAHPEVLNIFYQGFDKGEIA 711
           HTVS L G+PPGYVGYG+GGVLTEA+R+ PYSV+LLDE+EKAH +V  +FYQ FDKG + 
Sbjct: 652 HTVSSLKGAPPGYVGYGQGGVLTEAVRRNPYSVILLDEIEKAHSDVQELFYQVFDKGTLE 711

Query: 712 DGEGRVIDCQNIVFFLTSNLGYQTI--------VDYADEPAKLDEALYPELAAFFKPALL 763
           DGEGRVID +N +  LTSN+G   I        V       +L E L P L   FKPA +
Sbjct: 712 DGEGRVIDFKNTIILLTSNIGSSAIMQACLSQEVQQWPSTEELVEYLKPSLYKQFKPAFI 771

Query: 764 ARMEVIPYLPLGKEVLAQIVRGKLARLEKLFKTRYNAEVVIEESLIDEILSRATRSENGA 823
            RM ++PY PL  ++L QI+  KL ++    + +Y   V     LI+ +LSR T  ++GA
Sbjct: 772 GRMRIVPYFPLHDDLLVQIIEHKLNKVTARIEKQYATVVQYSNDLIELLLSRCTEVDSGA 831

Query: 824 RMLEAIIEGQLLPPVSLALLNKLAERAPVERIRLAAEAGEFI 865
           R ++ I+   +LP ++  LL  LAE    ++I +  E  E I
Sbjct: 832 RNVDNILNSSILPALATHLLIALAEHQLPKKITIDVENDEII 873