Pairwise Alignments

Query, 257 a.a., type IV secretion protein DotU from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., T6SS outer membrane component TssL (ImpK/VasF) from Variovorax sp. SCN45

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 17/197 (8%)

Query: 57  TECDNIEQIYRQTIE---EIKAIEIELTEQGYEHAILMAYRYILCAFLDESVMGTEWGAS 113
           T+ D + Q   + +E   E++++E       +E   +   RY+  A  DE ++ T W   
Sbjct: 38  TDPDLVAQALARHLENLLELQSLESRRDSTRFELENVADARYLKAALADEILLQTPWVGR 97

Query: 114 SLWAEHSMLSRFHNETWGGEKVFTILSRLEG--EPHRYQALLAFIYHCLILGFEGKYRVM 171
             W  H + +        G+ VF  +  L    EP +      +++  L LGF+GKYR  
Sbjct: 98  ERWTAHLLETSLFRTNIAGDLVFNRIEELLSGREPSKRDIARLYLF-ALALGFQGKYR-- 154

Query: 172 EGGQAEREKVISRLHQLLSSLEESEPQDLTRPTDHVVRAKY--TLS----RQMPVWSVFA 225
             G  +  +++    +L   + +  P D +     V    Y  TLS    R++P  S + 
Sbjct: 155 --GNGDTARLLGYREELFQFVYQ-RPADFSGRDRVVSERAYASTLSHIAPRKLPTLSRWT 211

Query: 226 GFIVLWVGLFLGYSYVL 242
              +L     L  S +L
Sbjct: 212 VLFLLSAATLLAVSELL 228