Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 440 a.a., T6SS component TssK (ImpJ/VasE) from Variovorax sp. SCN45

 Score = 85.5 bits (210), Expect = 3e-21
 Identities = 99/429 (23%), Positives = 177/429 (41%), Gaps = 46/429 (10%)

Query: 5   NRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIER 64
           +RV W+EG+ + PQHFQQ     +  +  +    + + +G+  L  +   L  G + +  
Sbjct: 8   DRVEWHEGMLLSPQHFQQFSARMDSLVAWQTLAAAPFSWGVRRLVFDHGLLPTGMLRVLA 67

Query: 65  AVGVMPDGTTFRIPQEDHLPDALEVTDASLANQI------VYLAVPLRSESLMEINWPEE 118
              ++PDGT  +    +     LE++ A  A+Q+      +YL +P+             
Sbjct: 68  LEAILPDGTAVQYSAAEAAHGTLELSLAPHADQLANEPLDIYLTLPV------------- 114

Query: 119 RGTGRYVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSA-------YASIAIGRI 171
            G  R+ +  +  R V     +    D  P  +  ML R   SA       +  + +G++
Sbjct: 115 TGPARHRAATVRFRSVAGAPVEDAVSDAEPANIPRMLPRLALSAGAVPPGTHVHLRLGQV 174

Query: 172 LEKRPDGSVVLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVAD 231
            +   D  VV   D  P  L V   + L      + G +R +A  +A++ + P+      
Sbjct: 175 FK---DNEVVKLGDAQPPLLEVARDNPLWTAAAALLGQLRGKAAFVAKQTAVPSSRVDDR 231

Query: 232 VSDFMLLQALNRLQPQMKHL-AELRS--LHPERLFECLSCVCGELATFTDESRLPPSLPS 288
           ++   L   L  L   + H  A LR+  LHP  ++  L  +   L+       LPP    
Sbjct: 232 LAHLELKDRLRSLLSGLPHAEAVLRTPHLHPLPMYWSLCALLASLSLLR-PGGLPPVPMD 290

Query: 289 YNHDSPSHSFQPLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIH---DPQLMESAEF 345
           Y+H +PS  FQPL+ +LR ++S       VS +  + K+            PQ +     
Sbjct: 291 YDHANPSLVFQPLLLALRDAVS------EVSQEYREHKFEFRQGAFETTLQPQWLAGKRI 344

Query: 346 IIAVKARMPLDELRRLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPR-QLPYHAGYT 404
           ++ ++ +   D+  + + +   V S    R L   + PG    P+  A    L   +GY 
Sbjct: 345 VVGLRGQS--DKDIQAWMKSAIVGSQSAYRSLREDRWPGAQRNPIDSADELGLRPGSGYL 402

Query: 405 YYQLDKTSA 413
            Y++ +TSA
Sbjct: 403 LYEI-QTSA 410