Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  444 bits (1143), Expect = e-129
 Identities = 214/443 (48%), Positives = 302/443 (68%)

Query: 1   MFARNRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRI 60
           M +RN V+W EGLF+KPQHFQQ  R +E  L +RL +++   YG SEL L+ EYLS G++
Sbjct: 1   MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLGSLNAAFYGFSELQLSTEYLSLGKV 60

Query: 61  AIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWPEERG 120
           AI +A G+MPDGT F IP +   P  LE+ D    +  ++L +PLR+E   E++WP+   
Sbjct: 61  AITKARGIMPDGTVFDIPADLPPPPPLEIEDDGSKDSEIFLCLPLRTEGGREVSWPDNAA 120

Query: 121 TGRYVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGSV 180
             RY ++  E++D HS  GD   +D++   LQL  + +D SAY  +A+ RILE+RPDGS+
Sbjct: 121 NFRYNAQAEEIKDTHSADGDLVQVDLAVPNLQLKRKADDSSAYTRLAVARILERRPDGSL 180

Query: 181 VLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVADVSDFMLLQA 240
            LD  F P  ++V  + AL RF+ E++  +RERA+N+A RI +  Q G+AD+ DF LLQA
Sbjct: 181 QLDETFYPTSVSVRAVPALQRFLEEITNTLRERARNLAARIGASGQSGIADIRDFNLLQA 240

Query: 241 LNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQP 300
           +NR  P   HLA     HPE+L+  +S  CGE  TFTDE+RLP   P+Y+H +   SF+P
Sbjct: 241 MNRWWPCFNHLARQGQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALRTSFKP 300

Query: 301 LIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELRR 360
           L  +LR++LS VL+PRAVS+ L+   +G+M   + D +L++ A+FIIAV+A +P   LR+
Sbjct: 301 LEDTLRRALSTVLQPRAVSLPLETLDFGVMTTTLEDRRLIDEADFIIAVRADLPPQTLRQ 360

Query: 361 LFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLTH 420
           +F Q+ KV S+E + +L+ LQLPGIPL PLPVAPR LP+HAG++Y++LD+   AWA +  
Sbjct: 361 MFIQKAKVTSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMKT 420

Query: 421 SSGFAFHVAAAFDDLELQFWAIR 443
           ++GF FHVA  F  LELQFWAIR
Sbjct: 421 ANGFGFHVAGEFPGLELQFWAIR 443