Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  183 bits (465), Expect = 8e-51
 Identities = 133/457 (29%), Positives = 222/457 (48%), Gaps = 27/457 (5%)

Query: 1   MFARNRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRI 60
           M  ++RV+W+EG+F+ PQHFQ Q  + ++ L E     + + +G+  L ++ + L+ G +
Sbjct: 1   MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAEATLRSTPFHWGVQALQVDEDALANGSL 60

Query: 61  AIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQI-VYLAVPLRSESLMEINWPEER 119
            ++R   V PDG+ +  PQ D LP A ++ D   AN + VY A+ L       +N+ E+ 
Sbjct: 61  QLKRLKLVFPDGSLYDAPQHDPLPAARDLKDLLKANDLKVYAALKLPEP--FGLNYVEDG 118

Query: 120 GTGRYVSR-RLEVRDVHSVQGDTTTIDVSPVRLQ--LMLEREDRSAYASIAIGRILEKRP 176
              +   R R +   +  +       +++ +RL   L+++ +    Y+   + + L +  
Sbjct: 119 HEHKAARRFRKQFDTLPDLNEGELENEITSLRLNVVLLVDGDSLDGYSHCPLAK-LTRNS 177

Query: 177 DGSVVLDPDFI------PCHLNVVGI-----SALHRFINEMSGLMRERAKNIAQRISSPA 225
            G   LDP F+        H  + GI      AL      +SG  RERA  I       A
Sbjct: 178 MGGFNLDPHFVHPTLHLGSHETIAGIGKRLLGALQAKSKALSGRRRERADQI-------A 230

Query: 226 QGGVADVSDFMLLQALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPS 285
           + G +DV+ F LL  +NR  PQ+ HL     LHPERL+  L+ + G L TFT +++L   
Sbjct: 231 EFGSSDVTLFWLLNTVNRAHPQLAHLLAHPRLHPERLYLFLADLAGGLLTFTLDTQL-SD 289

Query: 286 LPSYNHDSPSHSFQPLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEF 345
           +P Y+H  P+ S   L   +R  L  V+  + + I L + K       +HDP+L E A+F
Sbjct: 290 IPEYDHHDPAASLVKLDEMIRVMLDNVVPNQCIVINLTQTKPSHWQGQLHDPRLAE-ADF 348

Query: 346 IIAVKARMPLDELRRLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTY 405
            IAV A MP   L  L  +  KV S E I  +++  +PG+ L      P  +P      Y
Sbjct: 349 YIAVHADMPGASLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHAARLPNAIPVRLDNQY 408

Query: 406 YQLDKTSAAWAMLTHSSGFAFHVAAAFDDLELQFWAI 442
           + ++     +  +  +    F+  +AF +L+L+  A+
Sbjct: 409 FAIEPHGTVYERMISAQAICFYAPSAFTNLKLELMAV 445