Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  453 bits (1166), Expect = e-132
 Identities = 217/444 (48%), Positives = 306/444 (68%)

Query: 1   MFARNRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRI 60
           M +RN V+W EGLF+KPQHFQQ  R +E  L +RL++++   YG SEL LN EYLS G++
Sbjct: 1   MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLASLNAAFYGFSELQLNDEYLSLGKV 60

Query: 61  AIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWPEERG 120
           AI RA GVMPDGT F IP +   P  LE+ D +  +  VYL +PLR++   E++WP+   
Sbjct: 61  AITRARGVMPDGTVFDIPADLPPPPPLEIGDDACQDSEVYLCLPLRTDGGREVSWPDNAA 120

Query: 121 TGRYVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGSV 180
             RY ++  E++D HS  GD   +D++   LQL  + ED SAY  +A+ RILE+RPDGS+
Sbjct: 121 NFRYTAQVQEIKDTHSADGDLVQVDLAVPNLQLKRKTEDSSAYTRLALARILERRPDGSL 180

Query: 181 VLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVADVSDFMLLQA 240
            LD  F P  ++V  + AL RF+ E++  +RERA+ +A RI +  Q G+AD+ DF LLQA
Sbjct: 181 QLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA 240

Query: 241 LNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQP 300
           +NR  P  +HLA     HPE+L+ C+S  CGE  TFTD++RLP   P+Y+H +   SF+P
Sbjct: 241 MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKP 300

Query: 301 LIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELRR 360
           L  +LR+SLS VL PRAVS+ L+  ++G+M   + D +L++ A+FI+AV+A MP   LR+
Sbjct: 301 LEDTLRRSLSTVLRPRAVSLPLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQ 360

Query: 361 LFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLTH 420
           +F Q+ K+ S+E + +L+ LQLPGIPL PLPVAPR LP+HAG++Y++LD+   AWA ++ 
Sbjct: 361 MFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFHAGFSYFELDRRDPAWACMSK 420

Query: 421 SSGFAFHVAAAFDDLELQFWAIRS 444
           ++GF  H+A  F  LELQFWAIRS
Sbjct: 421 ANGFGIHIAGDFPGLELQFWAIRS 444