Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  245 bits (626), Expect = 2e-69
 Identities = 139/404 (34%), Positives = 224/404 (55%), Gaps = 4/404 (0%)

Query: 43  YGISELSLNPEYLSFGRIAIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLA 102
           +G   L ++ +YL+ G++ + +A GV PDG+ F +  +  +P  +    A +  Q VYLA
Sbjct: 7   WGFLGLDVDVQYLNMGKVVLNQASGVFPDGSLFEL--DSTMPPLVLQVPADVDGQAVYLA 64

Query: 103 VPLRSESLMEINWPEERGT-GRYVSRRLEVRDVHSVQGDTTTIDVSPVRLQLML-EREDR 160
           +PL   S +E+  P +     RYVS   +V D ++    +  I+ +   L+L+L E+   
Sbjct: 65  LPLAIGSQVEVRTPAQNDVLSRYVSCESQVIDSNAGVDASCRINCARPDLRLLLGEQPGD 124

Query: 161 SAYASIAIGRILEKRPDGSVVLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQR 220
           + + ++ + ++L    +G V LD DF+P  + +     L   + E+  L+  R   IA R
Sbjct: 125 ALHVTLQVAQVLNSTREGGVKLDADFVPTFIYLQRSGYLSSCVKEVISLLASRGDAIAAR 184

Query: 221 ISSPAQGGVADVSDFMLLQALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDES 280
           I        A V +F++LQ +NR +  ++H  +   + PE L+  L  + GEL+TF  E+
Sbjct: 185 IEGGGGAAGAQVGEFLMLQMINRSELVLRHYLDQGQVRPEVLYRALLSILGELSTFAIEN 244

Query: 281 RLPPSLPSYNHDSPSHSFQPLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLM 340
           +       Y H     SF+ L+  LR  LS VLE  A+ + L  R+YG++V P+ D +L+
Sbjct: 245 KRAQVDVRYRHGDQGMSFRGLMERLRTVLSSVLEQHALELSLQPRQYGVLVCPVSDLKLL 304

Query: 341 ESAEFIIAVKARMPLDELRRLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYH 400
            +A FI+A  A+   + LR+      K+  VE+IREL++L L GI + PLPVAPRQ+P+H
Sbjct: 305 GAATFILAASAQCDSEALRQRLPAHLKIGPVERIRELVNLHLAGIKVRPLPVAPRQIPFH 364

Query: 401 AGYTYYQLDKTSAAWAMLTHSSGFAFHVAAAFDDLELQFWAIRS 444
           AG TY+ L+ ++     L  S GFAFH +  F +LEL FWAIR+
Sbjct: 365 AGKTYFMLELSARDITQLEQSGGFAFHASGEFVELELNFWAIRN 408