Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Uncharacterized protein ImpJ/VasE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  267 bits (683), Expect = 4e-76
 Identities = 150/443 (33%), Positives = 246/443 (55%), Gaps = 6/443 (1%)

Query: 5   NRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIER 64
           +RV+W+EG F+ PQ FQQQ+RY E+ +  R   ++ + +G S  +++ E L+ G++ ++ 
Sbjct: 5   DRVVWSEGQFLLPQMFQQQERYLEHVMHYRSLPLTPFFWGFSHYNIDGEALNIGKLILKE 64

Query: 65  AVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWPEE-RGTGR 123
           A G+ PDGT F  P    LP  L +    L NQ + LAVP+R+ +  E  +        R
Sbjct: 65  ASGIFPDGTPFNAPDHTPLPPPLTILPEHL-NQQICLAVPVRAPNSEETTFDNNPESLAR 123

Query: 124 YVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGSVVLD 183
           +     ++RD +S+      + +S +RL+L+ E+    A+  + + RI    PDG + +D
Sbjct: 124 FSVHEHDIRDANSLGRGAQLLQLSHLRLRLLPEKAVTGAWIGLPLTRITGLNPDGRIDID 183

Query: 184 PDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGG--VADVSDFMLLQAL 241
            D IP  +N    S +  +++ ++ L+R RA ++A+R++     G   A+VSD++LLQ L
Sbjct: 184 HDLIPPIINYQASSLMCTWLSWINDLIRMRADSLAERLTGSDNHGHEAAEVSDYLLLQIL 243

Query: 242 NRLQPQMKHLAELRSLHPERLFECLSCVCGELATFT-DESRLPPSLPSYNHDSPSHSFQP 300
           NR +P + HLA+   L PE L+  LS + GEL+T+   ++R P     Y H +P    + 
Sbjct: 244 NRFEPLLTHLAKT-PLAPEVLYRYLSELAGELSTYVRPQTRRPAEYKEYKHLTPYAGLKS 302

Query: 301 LIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELRR 360
           L+  ++  L+ VL   A  I+L +  YG++ A +    L + +  ++A+KA MP D L +
Sbjct: 303 LVDEVQFLLNAVLIRGAQRIELKEGTYGILNAVVAPSDLADFSTLVLAIKASMPTDVLLQ 362

Query: 361 LFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLTH 420
            F  QTK+   +++ ELI   LPG+ L  LPV PRQ+P+ AGY YY + +  A W  +  
Sbjct: 363 HFAAQTKIGPSDRLPELIRSHLPGLALQVLPVPPRQIPFQAGYIYYDIRREGALWEHIAR 422

Query: 421 SSGFAFHVAAAFDDLELQFWAIR 443
             G A H A  F  LE + W +R
Sbjct: 423 YGGMAMHTAGEFPGLETELWGVR 445