Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., type VI secretion system baseplate subunit TssK from Erwinia tracheiphila SCR3

 Score =  274 bits (701), Expect = 4e-78
 Identities = 148/446 (33%), Positives = 258/446 (57%), Gaps = 7/446 (1%)

Query: 5   NRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIER 64
           N+V+W+EGLF++PQ FQQQ+RY EY   +R +T++ + +G +   ++ E LS+G++ +  
Sbjct: 4   NKVVWSEGLFLRPQLFQQQERYLEYYAHKRAATITPFFWGYAHYDIDFEALSYGKLVLRS 63

Query: 65  AVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWP--EERGTG 122
             GV+PDGT F IP    LP+ L ++   L  +I+YLAVPLR ++  E  +   +     
Sbjct: 64  GRGVLPDGTPFDIPDHADLPEPLNISPDHLG-KIIYLAVPLRLDNRDETIFDSGDYGSLA 122

Query: 123 RYVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGSVVL 182
           R+ +   E+ D +S+      + ++ +RL+L+ E E   ++  + + R+   +PDGSV+L
Sbjct: 123 RFSAFETELSDTNSICQGPKPVQLASLRLKLVAESEMTESWIGLPLARVKAIQPDGSVLL 182

Query: 183 D-PDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSP--AQGGVADVSDFMLLQ 239
              D+IP          L  ++  ++GL++ RA+ +A+R+SS        A+V D++LLQ
Sbjct: 183 HVEDYIPPVTGYAANRLLTEWLTHLNGLVKMRAEMLAERLSSSDGKASSSAEVVDYLLLQ 242

Query: 240 ALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFT-DESRLPPSLPSYNHDSPSHSF 298
             N+ +P + HL  +  L P  L++ L+   GEL+TF   ++R P S P Y+H     S 
Sbjct: 243 IFNKYEPVLDHLRNIPELPPIMLYQELAKFSGELSTFIRTKTRRPKSAPGYDHARLYQSI 302

Query: 299 QPLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDEL 358
           +PL+  L   L+ +L      I L  +  G+  A +   +L   +  ++AV A++P+D L
Sbjct: 303 RPLVEELHDLLNQILVRAGQLITLHAKGNGVWSASVLPGELRTFSNLVLAVNAQLPMDVL 362

Query: 359 RRLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAML 418
           ++ F+ QTK+++ +++ EL+   LPG+ L  LPV PRQ+PY +GY Y+ L K+   W  +
Sbjct: 363 QQQFSAQTKISAPQQLHELVRSHLPGLVLQALPVPPRQIPYQSGYVYFDLLKSGPFWDKI 422

Query: 419 THSSGFAFHVAAAFDDLELQFWAIRS 444
           + +   A HVA  F +L+++ W +R+
Sbjct: 423 SGTGALALHVAGDFPELKMELWGVRN 448