Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., type VI secretion protein, VC_A0114 family from Enterobacter asburiae PDN3

 Score =  296 bits (757), Expect = 1e-84
 Identities = 160/445 (35%), Positives = 259/445 (58%), Gaps = 2/445 (0%)

Query: 1   MFARNRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRI 60
           M    +V+W EG+F++P HFQ+ + Y    + E  +    YL+G  ++ L+   L  G I
Sbjct: 1   MTKAEKVVWTEGMFLRPHHFQRTESYLLNHVREWGALQRSYLWGFLDVELDEAMLRQGCI 60

Query: 61  AIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQIVYLAVPLRSESLMEINWPEERG 120
           A+    G++PDGT F++    + P  L++ D +L N+ V LA+P+R     E+ + EE  
Sbjct: 61  ALSYCSGLLPDGTFFQVRNGRNGPVPLKIPD-NLTNEKVVLALPVRRGEREEVIFSEEPA 119

Query: 121 T-GRYVSRRLEVRDVHSVQGDTTTIDVSPVRLQLMLEREDRSAYASIAIGRILEKRPDGS 179
           +  R+++   EV D +++     T+    +RL LMLE++  + + +I +  + EKR D  
Sbjct: 120 SLARFIAFEQEVEDDNAMSVGDATVQFGRLRLTLMLEKDLTAEWTAIGVAFVTEKRNDNH 179

Query: 180 VVLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRISSPAQGGVADVSDFMLLQ 239
           V LD  +IP  LN      ++  IN++ GL+ +R++ I  R+  P +   +++ +F LL 
Sbjct: 180 VRLDNSYIPPMLNANNSPQIYSMINDLHGLLVQRSQQIGGRLRQPGRFNTSELIEFTLLS 239

Query: 240 ALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPSHSFQ 299
            +NR   ++ HL  L  LHPE L+        ELAT+T +      LP Y+HD  ++ F 
Sbjct: 240 LVNRHLGEVSHLKTLPLLHPETLWRSWLPFATELATWTSQRTAESVLPIYDHDDLANCFS 299

Query: 300 PLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFIIAVKARMPLDELR 359
            L+  LRQ LS+V+E  A+ + L++R +GL +A + +  ++    F++AVKA +P + L+
Sbjct: 300 KLMLMLRQGLSLVMEDHAIQLPLNERSHGLNIATVPETSMVREFGFVLAVKANVPGEHLQ 359

Query: 360 RLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYYQLDKTSAAWAMLT 419
             F  Q KVA V KIR+L+ LQLPGI L  +PVAP Q+P+HAGY+Y++L+K S  W  + 
Sbjct: 360 THFPAQMKVAPVSKIRDLVQLQLPGIMLRAMPVAPPQIPWHAGYSYFELEKGSELWHEMD 419

Query: 420 HSSGFAFHVAAAFDDLELQFWAIRS 444
            S  FA H+A  F  L+++FWAIRS
Sbjct: 420 KSGAFALHLAGEFPGLDMEFWAIRS 444