Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score = 67.0 bits (162), Expect = 1e-15
 Identities = 73/303 (24%), Positives = 131/303 (43%), Gaps = 21/303 (6%)

Query: 7   VIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRIAIERAV 66
           + W++G+ + PQHFQQQ    E  L         + +G+    ++   L  G + I    
Sbjct: 11  IAWHDGMLLAPQHFQQQALRNERLLTYHAGHARPFHWGVVHFQVDRVNLVSGLVRIRELE 70

Query: 67  GVMPDGTTFRIPQEDHLPDALEVTDASLANQI--VYLAVPLRSESLMEINWPEERGTGRY 124
            +MPDG       +   P  LEV  ++ A+ +    + + L     +    P      R+
Sbjct: 71  AIMPDGLIVHHAGDSTEP--LEVDISAYADPVGQTQITIHLVIPQALADRAPGPGEISRF 128

Query: 125 VSRRLEVRDVHSVQGDTTTIDVSPVRLQLML------EREDRSAYASIAIGRILEKRPDG 178
           +S  +E R V  + G    + ++ +R +L L       ++    + S+ + +    R D 
Sbjct: 129 LS--VEGRPVPDLNGG-EEVAIARLRPRLGLFATTGPNQKPPQKFVSMPVAQ-ATFRNDA 184

Query: 179 SVVLDPDFIPCHLNVVGISALHRFINEMSGLMRERAKNIAQRI---SSPAQGGVADVSDF 235
            V+   DF+P  L+V   SAL R   E+   +RE+A  +A+R    +  A   +AD +  
Sbjct: 185 FVL--TDFVPPTLSVTANSALGRLGGEIVRRVREKALFLAERSGVGTGNAATELADAART 242

Query: 236 MLLQALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLPSYNHDSPS 295
            +   +  L P    LA +   HP  ++  L  + G L+ F +   +P  L  Y+HD P 
Sbjct: 243 EIRSLVTGLPPLEAQLA-VGVCHPFDVYLSLCTLAGHLSAFAN-GAVPAKLSRYDHDDPM 300

Query: 296 HSF 298
            ++
Sbjct: 301 SAY 303