Pairwise Alignments

Query, 444 a.a., type VI secretion system baseplate subunit TssK from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score =  167 bits (424), Expect = 5e-46
 Identities = 120/456 (26%), Positives = 209/456 (45%), Gaps = 19/456 (4%)

Query: 1   MFARNRVIWNEGLFIKPQHFQQQQRYTEYCLDERLSTVSRYLYGISELSLNPEYLSFGRI 60
           MF   +V+W EGLF++PQHFQ Q  Y E  L+  +     + YGI +L  +   LS   +
Sbjct: 1   MFKAEKVLWGEGLFLRPQHFQLQDSYHEQRLNHTIRATIPFAYGIQKLQFDEVQLSTHVL 60

Query: 61  AIERAVGVMPDGTTFRIPQEDHLPDALEVTDASLANQI-VYLAVPLRSESLMEINWPEER 119
           A+E    +  DG  ++ P +D LP  + + + SL  ++ +YLA+P+   +   ++  +  
Sbjct: 61  ALENIEMIWQDGEIYQAPAQDLLPAPVLLDELSLRGEMTIYLALPILQANKKNVSDEQAS 120

Query: 120 GTGRYVSRRLEVRDVHSVQGDTTTIDVSPVRLQL---MLE-----REDRSAYASIAIGRI 171
            + RY    +E  D+ +        D++ +R +    +LE      ++   +  + +G+ 
Sbjct: 121 QSSRYHDYLVETHDLFTT---AMPADITLLRRRAEFKLLETHVHPNQELEGFLYLPVGK- 176

Query: 172 LEKRPDGSVVLDPDFIPCHLNVVG----ISALHRFINEMSGLMRERAKNIAQRISSPAQG 227
           L+++  G   LD  FIP  L V      IS L R +N +   ++    N  +      + 
Sbjct: 177 LKRQSSGIFELDRKFIPPILQVEASETLISNLRRTLNIIKAKIKTIQNNNRENEQKLIEF 236

Query: 228 GVADVSDFMLLQALNRLQPQMKHLAELRSLHPERLFECLSCVCGELATFTDESRLPPSLP 287
              D+  F L+ ALN     + HL +   +HPERLF  L  + G L TF+    +   LP
Sbjct: 237 RSGDIVSFWLVNALNTAHAGLNHLLQNPQVHPERLFFELLRLTGSLLTFSTAYEV-DHLP 295

Query: 288 SYNHDSPSHSFQPLIRSLRQSLSVVLEPRAVSIQLDKRKYGLMVAPIHDPQLMESAEFII 347
            Y H     SFQ L   LR  L  ++  R +SI L + +    +  +   ++       I
Sbjct: 296 QYKHHQLQESFQQLDVILRDLLDTIISNRYISIALKEIRPSYWLGSLESDKINRDTRLYI 355

Query: 348 AV-KARMPLDELRRLFTQQTKVASVEKIRELISLQLPGIPLTPLPVAPRQLPYHAGYTYY 406
           AV  + M   EL ++   + KV S   + + +   LP IPL  L   P  +P  +G +Y+
Sbjct: 356 AVSSSMMQTHELIQIVPLRFKVGSTVDVEQRVVAALPAIPLHHLVQVPTAIPVRSGVSYF 415

Query: 407 QLDKTSAAWAMLTHSSGFAFHVAAAFDDLELQFWAI 442
           +++     +  +  S     +V A F D+ ++  A+
Sbjct: 416 EIEAHHELYQRMIESEAICIYVPAGFQDISIELIAV 451