Pairwise Alignments

Query, 158 a.a., type VI secretion system lipoprotein TssJ from Vibrio cholerae E7946 ATCC 55056

Subject, 169 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 2e-13
 Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 14/150 (9%)

Query: 11  LTVLTACSSS-----DKYEPAKEPTKVTFSLVSDEGVNPNIWGEASPIEIQVFELKDDSM 65
           L +LTAC+          E   +   V     +  G+NP   G+A+P+ +++FELK+ + 
Sbjct: 12  LLLLTACAKDAAKPETTAEAEADTAAVELHFHAISGLNPGANGQAAPVRVRIFELKNAAT 71

Query: 66  FMSSDYDQIKTDYKKALRSNFVKNYDYVLTPGQFKFVNAFEVDEETNYIGVMAHFAEPEL 125
           F  SDY  +    +  L  + +   + ++ PG+   +   ++D  T  IG++  + E + 
Sbjct: 72  FARSDYFALADRAQSTLGLDLLDQDEVMVQPGEQLTIQR-DLDPSTRQIGLLVGYRELDR 130

Query: 126 SEWKKAVKVINKGREYHLLMLFKDYDVKLD 155
           ++W+  + V    R+Y       +Y + LD
Sbjct: 131 AQWRTVINV--PARQY------TEYQISLD 152