Pairwise Alignments

Query, 495 a.a., type VI secretion system-associated FHA domain protein TagH from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score = 69.3 bits (168), Expect = 3e-16
 Identities = 103/482 (21%), Positives = 174/482 (36%), Gaps = 51/482 (10%)

Query: 8   SLTLLVTNAQHLESGLSAQHTWTSSGGVIGSSPNAQWRLVDAQGSVKPMHCEVMMVDGAY 67
           SL L +T+   +  G  ++ +       IG S +  W L D +  V   HC +   DG Y
Sbjct: 2   SLCLTITSYHKITPGQCSEKSMNQGAMAIGRSSDNDWVLPDPERLVSSQHCVIQYKDGRY 61

Query: 68  CLKD-SCGSTYVNGADMPLGVGQMARLTHKDEVSVGPYRLRVLFG-NAIEVEEQYGSLDA 125
            L D S     +  A + +  G    L   + + +G Y ++     N   ++ Q  + DA
Sbjct: 62  YLTDNSTNGVELVKAGIRMRRGNSELLQDGELIRIGDYEIQARIDFNVQSIDSQPFTGDA 121

Query: 126 LFASKDEDLLADLTLDIEPEKHELPTNTDPLQALDNLMGAAGSSTSLLDDPKSEQPLSAQ 185
              +  E L+  +     P     P      Q        A S  +L D      P +  
Sbjct: 122 --PNSFEALMGAVVNT--PAPVATPVIAPQFQG-------ASSMDTLPDLFDFLSPTAVP 170

Query: 186 PSLVPQDNLVLQNADFTPQADSEYEMTSSIRLKKILGFAKATFAKQTKSEAPNVTSATPT 245
           P  VP D++  +  DF P       +   +    ++  A          +AP    + P 
Sbjct: 171 PPTVP-DHVPSEQHDFRPPTP----VAMPVAEPPVVSGAVIPEDWDLFGDAPAPVVSAPP 225

Query: 246 ISQYKTSESNVSEGFTMDEKVLDLLEEEVAKSFQPQLEKSAYSTMHTSSTSQANHLVTGP 305
           +     +   V+    + E +L      VA S QP L ++                    
Sbjct: 226 LP----TPQPVTPPPPVVESMLP-----VADSQQPDLLQA-------------------- 256

Query: 306 ILEGLGVDLSDENDMNRMHLLSQELGESLQACVRGLLD-LHQQVS-ESRFGTLNRNLQPI 363
            L G G+D     D  +     + +G S +  V GL+D L  + S +  F      +QP 
Sbjct: 257 FLRGAGLDQL-RLDKAQAEAQMESIGRSYRLMVEGLIDVLRARASLKGEFRMQQTMIQPA 315

Query: 364 EDNPLRLGLSYEETIRTLYDADKSVVHLSAPAAIAESLKTVRDHNEAMQFATSEALSQIL 423
           E+NPL+   + +E +  L         ++   A+ +S   +R H  A+      A+  +L
Sbjct: 316 ENNPLKFAPNADEALLLLLRHGNQAF-MAPDLAVRDSFNDLRAHQLAVMAGVEAAIKHLL 374

Query: 424 NAFSPQVMLRRFHHYKRNSDTTQTSTDAWAWNMYCSYYQELTSNRQRGFEKLFWEIFEQA 483
           + F P  +  R       S     S  A  W  +   Y  ++   Q  F+ LF   F +A
Sbjct: 375 SRFEPAQLEERMGKPGGLSSLFNGSRQAQYWQQFTELYSNISREAQEDFQDLFGREFSRA 434

Query: 484 YD 485
           Y+
Sbjct: 435 YE 436