Pairwise Alignments

Query, 495 a.a., type VI secretion system-associated FHA domain protein TagH from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., type VI secretion protein from Pseudomonas simiae WCS417

 Score = 45.4 bits (106), Expect = 3e-09
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 366 NPLRLGLSYEETIRTLYDADKSVVHLSAPAAIAESLKTVRDHNEAMQFATSEALSQILNA 425
           NPL++    +  + +L    +S   L+A  A+AE+ + ++ H  AM  A   A+   L A
Sbjct: 261 NPLKVCADSQAAMASLLGTGESG-ELAAEQAVAEACRDLQVHQLAMVVACRAAVRGALAA 319

Query: 426 FSPQVMLRRFHHYKRNSDTTQTSTDAWAWNMYCSYYQELTSNRQRGFEKLFWEIFEQAYD 485
           F+P  +L  F   +R     +  T+A  W  Y  +Y+ L      G ++L    F  AY+
Sbjct: 320 FAPGQLLPCF---EREGKRPRFFTEAAHWRSYQRHYRRLVDENSLG-DQLLRNDFSNAYE 375

Query: 486 RKIR 489
            ++R
Sbjct: 376 EQVR 379



 Score = 41.2 bits (95), Expect = 7e-08
 Identities = 47/175 (26%), Positives = 66/175 (37%), Gaps = 24/175 (13%)

Query: 25  AQHTWTSSGGVIGSSPNAQWRLVDAQGSVKPMHCEVMMVDGAYCLKD-SCGSTYVNGADM 83
           A+ T+   GGVIG      W + DA   +   H  V   +G Y L D S     V+G+  
Sbjct: 17  ARKTFEGVGGVIGRGVGCDWIIPDAHRLISSHHALVSYREGHYFLTDISSNGITVSGSME 76

Query: 84  PLGVGQMARLTHKDEVSVGPYRLRVLFGNAIEVEEQYGSLDALFASKDEDLLADLTLDIE 143
            L  GQ   +T  +   +G   +R                  L A++      +   D+ 
Sbjct: 77  RLDKGQARLITEGEVYQLGQLEIRA----------------RLVANERRPFARN---DLI 117

Query: 144 PEKHELPTNTDPLQALDNLMGAAGSSTSL--LDDPKSEQPLSAQPSLVPQDNLVL 196
           P+   L    DPL ALD       SS  L  LD      P S     V +D+LV+
Sbjct: 118 PDDAFL--GLDPLHALDREQLCVDSSAELDALDASTQVSPQSHMQGPVDRDHLVV 170