Pairwise Alignments

Query, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., type VI secretion system baseplate subunit TssG from Variovorax sp. OAS795

 Score =  100 bits (248), Expect = 7e-26
 Identities = 85/315 (26%), Positives = 130/315 (41%), Gaps = 30/315 (9%)

Query: 31  YNFYQLVELLQKLADINPESEEWERDCRLVFSANPSLGFSPSDVMALEA----------- 79
           Y+++Q + L+++               R+    N SLGF  +D+ A+E            
Sbjct: 15  YSYFQAIRLMRRAGA-----------SRIRVRPNLSLGFPDTDIDAIERLPAPETTEGGE 63

Query: 80  ---RDDERWVMLTNFFGLSGAQSPLPGFILEQLVTEEPGG--YKQPFLDFFNNRLINLVY 134
                 + + +  NFFGL G  SPLP F  E L+ +   G   ++ FLD  +  L   ++
Sbjct: 64  GAHATGDTYRVTANFFGLYGVSSPLPTFYTEDLIDDHREGRHARREFLDILHGALYPQLF 123

Query: 135 RVWRKYRYYVR-FQPGAQDVFSAQLFALVGLGDPDLRGETPINWCKMLAYAGTLAGRSRS 193
             WRKYR  +R  + G  D     L+A  GLG    R   P     +L Y    A R+RS
Sbjct: 124 EAWRKYRLQLRAVEEGDPDALD-MLYAFAGLGSAQQRDSLP-GANGLLRYLNLFAQRTRS 181

Query: 194 PQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQQLALGKQNARLGMDTVIGESVIDCSGK 253
              +  ++A  F    + +     + V I + Q+L LG Q   LG D  +G  V D    
Sbjct: 182 AMGLRTLLADAFAPATIEVESCEPQWVPIPQDQRLRLGLQANVLGEDCPLGTQVEDSDNL 241

Query: 254 FIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYDLELAMDEREAPLFCLDTRQ 313
             I I  L  + F   LP    ++ L  LV F L   +   +EL + + E    C     
Sbjct: 242 LHIVIGELPEALFQQLLPGADGHRTLQFLVRFYLTRPLQVSVELRLAKGEGRGACTGAAA 301

Query: 314 NIALGWTSFLGQDAA 328
              LG  ++L  + A
Sbjct: 302 WSRLGLDTWLSGEQA 316