Pairwise Alignments

Query, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  255 bits (651), Expect = 1e-72
 Identities = 139/329 (42%), Positives = 194/329 (58%), Gaps = 14/329 (4%)

Query: 1   MGHTERNAAVDLNSDPAQASPLSLPGNVREYNFYQLVELLQKLA--DINPESEEWERDCR 58
           M H +R A  DL           L  N  +YNF+QL+E L  L   D+ P   +     R
Sbjct: 1   MAHPDRQATADLAD--------KLLANAHQYNFFQLLERLHGLHGDDLEPRWADEATRLR 52

Query: 59  LVFSANPSLGFSPSDVMALEAR--DDERWVMLTNFFGLSGAQSPLPGFILEQLVTEEPGG 116
           +  +++P L F  SDV   E    +DER+ + T F GL G  SPLP + LEQ+  E   G
Sbjct: 53  VRLASDPRLTFPVSDVYKAERMPGEDERYRVCTTFMGLHGTDSPLPTYYLEQVAYEHAQG 112

Query: 117 Y--KQPFLDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGLGDPDLRGETP 174
              +  F DFFN+ L++L++R+WRKYRYY+RFQPGA+D FS  +FAL+GL D  LRG+T 
Sbjct: 113 VGVRPAFFDFFNHYLLSLLHRIWRKYRYYIRFQPGARDGFSQYMFALLGLNDKQLRGDTT 172

Query: 175 INWCKMLAYAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRRVSIDRSQQLALGKQN 234
           + W ++L++AG +A R R+P  VAGIIAHCFDL  V IR++  R V+ +  Q ++LG+ N
Sbjct: 173 LPWSRLLSFAGVIASRGRAPGTVAGIIAHCFDLTHVQIREFETRTVTTNSKQLVSLGRSN 232

Query: 235 ARLGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPLCKLVEFILREQMAYD 294
             LG   ++G      S KF I I  L +++  D LPSG  +  L  L++F+LR+ +AYD
Sbjct: 233 GELGSTFMVGSRTRTRSSKFTILISELDQAQLHDLLPSGINFGRLRALIDFLLRDGLAYD 292

Query: 295 LELAMDEREAPLFCLDTRQNIALGWTSFL 323
           LEL + +     F L   Q   LGWTSF+
Sbjct: 293 LELRLKQNALSPFYLHRSQGAYLGWTSFV 321