Pairwise Alignments

Query, 338 a.a., type VI secretion system baseplate subunit TssG from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 5e-24
 Identities = 96/351 (27%), Positives = 153/351 (43%), Gaps = 36/351 (10%)

Query: 1   MGHTERNAAVDLNSDPAQASPLSLPGNVREYNFYQLVELLQ----KLADINPESEEWERD 56
           M  T R +A  L  D A+A P         + F+QLV LL+    +   ++  +   E  
Sbjct: 1   MASTHRRSAPGL-IDQARAEP-------HRFEFFQLVRLLRLHYSRTGRMDLATRPHEDP 52

Query: 57  CRLVFSANPSLGFSPSDVMAL----EARDDERWVMLTN----FFGLSGAQSPLPGFILEQ 108
            R  F    SL F  S+V  L    E +     + L+     F GL G    LP    E 
Sbjct: 53  LR--FRTQLSLAFPASEVSDLHFEREGKVSPAGLPLSEVQVTFMGLVGPSGVLPRPYTE- 109

Query: 109 LVTEEPGGYKQP----FLDFFNNRLINLVYRVWRKYRYYVRFQPGAQDVFSAQLFALVGL 164
           L+ E    Y+      FLD F++R+  L Y  W+KY++++  +      F   L  LVGL
Sbjct: 110 LLLERHVQYRDDAAHAFLDIFSHRMTTLFYEAWQKYKFHIEHERNGTSGFDGYLLNLVGL 169

Query: 165 GDPDLR---GETPINWCKMLA--YAGTLAGRSRSPQVVAGIIAHCFDLPDVSIRQWVRRR 219
           G    +    E P    + L   +AG L+ + R+   +  ++   F LP + ++ +  R 
Sbjct: 170 GPRAQKLKFEEQPSALRRELFSYFAGLLSQKPRNALNLERMLGFYFSLP-IKVQPFAGRW 228

Query: 220 VSIDRSQQLALGKQNARLGMDTVIGESVIDCSGKFIICIKRLSRSRFADFLPSGKEYQPL 279
           + +   Q   LG++NA+LG   V G  V D      I +  LS + +  F P    Y+ L
Sbjct: 229 LHLQPEQCTQLGRRNAQLGHSAVAGNRVWDYQSCIRIELGPLSLADYQRFQPGTACYRKL 288

Query: 280 CKLVEFILREQMAYDLELAMDEREAPLFCLDTRQNIALGWTSFL---GQDA 327
            +LV F +  ++ +++   +     P   L    N+ALGW  +L   G+DA
Sbjct: 289 VELVRFYIGAELDFEIAPRLKREAVPRAQLGRSGNVALGWLGWLKRPGRDA 339