Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., type VI secretion system baseplate subunit TssF from Variovorax sp. OAS795

 Score =  301 bits (771), Expect = 5e-86
 Identities = 192/593 (32%), Positives = 301/593 (50%), Gaps = 21/593 (3%)

Query: 5   KYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTDPDVERLLEGFAFLTARLREKVEDEFP 64
           +Y++++L  L+E   EF   +P L+  L   ++DPDVERLLEG AFL    R+K++DEFP
Sbjct: 8   RYYQDQLQQLRELSVEFARGNPALAPMLAEPSSDPDVERLLEGVAFLNGLTRQKLDDEFP 67

Query: 65  ELTHSIINMLWPNYLRPIPSMSVVAFEPDKSVSEKQVIPRNTQLDSKPVFGTACHFNTCR 124
           EL   +   L+P+YLRP+P+ ++VAFEP   +SE   +P   +L S P+ GT C F T  
Sbjct: 68  ELLQELATQLFPHYLRPVPASTLVAFEPKGMLSEPMHVPAGVELASLPIDGTRCRFRTSH 127

Query: 125 DVALYPMQCQGVH-AEHTREATTIQISLRMLGDMTVGDAKLDTVRFYLGGDKYSSQTLYL 183
            + + P+  +G    +H   A  +++   + G + +   +  +VR +LG     +  L +
Sbjct: 128 ALQVEPLALRGFELVQHAGRAPALRMDFGLQG-IDLSQWQAASVRLFLGAGYAEASNLLM 186

Query: 184 WLHHYLQKMTI-----EVQGVEFALPADAFSTVGFSSDQALLPYPKNVYDGYRILQEYLS 238
            L   + ++ +     +  G  FAL   A    GF  D  +L YP++ + G+RI+QEY +
Sbjct: 187 LLMTKVAQVEVVAGGPQQSGARFALGPQALRCAGF--DHEMLAYPEHAFPGFRIIQEYFA 244

Query: 239 FPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLPADTRVRQDNFQLYCTPVINLFEHD 298
            PE   F ++ G  +         F++ +  +        +R+ +  L   P +NLF+H 
Sbjct: 245 LPEKLLFVELGGLDRWRTGRSGMQFSVWLTLTDLPEWAPELREHSLLLNVVPALNLFQHA 304

Query: 299 ADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDTQSEGKRIRGEKRIYSSF--ES 356
           A+PI      SEYR+ P +    HY+IFSVD+V G+  TQ E      E+R Y+ F   +
Sbjct: 305 AEPIQNEHLTSEYRVRPENEKKGHYQIFSVDRVCGY--TQGE-----SEERFYTPFGMAA 357

Query: 357 FQHEVERVRHRQALYYRTRVKESIRGDGFDSFISFVRGDETLSMGVDEAVSIKLTCTNRL 416
                 +    QA Y  +R   ++ G G D F+S     +       E +SI LTCTN  
Sbjct: 358 LPVRTGQAAREQASYSLSRRAATV-GRGQDLFLSIATPRQQALK--SETLSITLTCTNAE 414

Query: 417 LPLELGVGDICVATDSSPPFATFKNITVPSQSLRPVLDGSLLWTLISNLSLNYLSLLSKD 476
           LP  L +GDI   T SSP    F+NI   +  L P  D  LLW +IS++SLN+LSL    
Sbjct: 415 LPESLKLGDISQPTSSSPERLGFRNIRAVTPQLNPPADEHLLWRMISHISLNFLSLADAA 474

Query: 477 ALSCVLRAYDFRALVDRQAERVARMRLDGIVKIESKPVDKILRGLPVRGLQSTLYVDQAG 536
            L  +L  Y F    D   E   R R+ GI  +E++P  +++    + G +  L    + 
Sbjct: 475 NLKMMLDLYVFSERQDHGREIANRHRIAGIESLEAEPETRLIGRRMLSGQRLRLLCRSSH 534

Query: 537 FGSEGDLFLFGTVLSHFFALYASINSFHELVVVNISNQEKYSWGTQSGMQPLI 589
           F S G L++FG V+  F   YA+IN++  L + +      + W  + G Q L+
Sbjct: 535 FASLGGLYVFGCVIERFLGDYAAINAYTRLELKDADTGAVFEWPARLGRQCLL 587