Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., type VI secretion system baseplate subunit TssF from Variovorax sp. OAS795

 Score =  227 bits (579), Expect = 1e-63
 Identities = 174/639 (27%), Positives = 290/639 (45%), Gaps = 73/639 (11%)

Query: 7   FREELAFLKEQGKEFTEIHPQLSRFLH---GRTTDPDVERLLEGFAFLTARLREKVEDEF 63
           + +EL + +E   EF    P+++  L        DP VERL+E  AFL+AR+  K++ E+
Sbjct: 9   YEQELRYFRESSSEFARAFPKIAHRLGIEGQEVADPYVERLIEATAFLSARVNLKLDAEY 68

Query: 64  PELTHSIINMLWPNYLRPIPSMSVVAFE---PDKSVSEKQVIPRNTQLDSKPVFG--TAC 118
           P  T  ++++++PN+L P P+M+V +F     D +++    +PR + L ++   G  T C
Sbjct: 69  PRFTGHLLDIVYPNFLAPTPAMAVASFAHDPDDANLATGPTLPRGSGLRARQAVGQNTHC 128

Query: 119 HFNTCRDVALYPMQCQ-------------GVHAEHTREATTIQISLRMLGDMTVGDAKLD 165
            F T   + L+P++ Q               H +       ++I L     +      +D
Sbjct: 129 EFRTAGALRLWPIEVQRAQYFTYAPDLPLNTHPQSRAIRGGLRIGLHATAGLKFNQIAID 188

Query: 166 TVRFYLGGDKYSSQTLYLWLHHYLQKMTIEV-----------QGVEFALPADAFSTVGFS 214
            +  +LGG    ++ +   LH       I V           QG   +LPA A   VGF 
Sbjct: 189 ELVMHLGG----AEDVAWQLHECALGQPIGVMVRPLSPTGALQGEARSLPASAIGAVGFE 244

Query: 215 SDQALLPYPKNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTLRIHFSKTLP 274
            D+ALLP     + G+R+LQEY +FP+ F F  + G    L      D  L + FS+   
Sbjct: 245 DDEALLPVTATGFSGFRLLQEYFAFPQRFQFLRISGLQALLSTMPVSDLELVLLFSRGDA 304

Query: 275 A-DTRVRQDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVG 333
           A +  V  DN QL+C P++NLF    D + LT   S++ +VP    P  +E+ +V +VVG
Sbjct: 305 ALEKLVGVDNVQLHCVPIVNLFNKRLDRVPLTEGVSQFHLVPDRTRPQDFEVHTVTEVVG 364

Query: 334 WQDTQSEGKRIRGEKRIYSSFESFQHEVERVRHRQALYYRT-------RVKESIRGD--- 383
                + G      ++++  F S  H     RH    Y+ T        V++   G    
Sbjct: 365 ---HGAPGADAAAAEQLFRPFYSAFH---GTRHSHPAYFTTTRDPRMLSVRQRTEGHRSS 418

Query: 384 --GFDSFISFVRGDETLSMGVDEAVSIKLTCTNRLLPLELGVGD----ICVATDSSPPFA 437
             G + ++  V   +         +++   CTNR LPL + +G      C+    S P  
Sbjct: 419 HIGSEVYMQIVDPQQAPYSAALRQLAVSALCTNRDLPLLMPLGRENDFDCI---DSFPAQ 475

Query: 438 TFKNITVPSQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAER 497
             + +  PS+ + PV+   L W ++ +L+LNYLS+             +   L    A+ 
Sbjct: 476 RVRMVRGPSRPVSPVVSQGLGWRVLDHLALNYLSISDSTPEQGAAALRETLMLYAVHADE 535

Query: 498 VARMRLDGIVKIESKPVDKILRGLPV-------RGLQSTLYVDQAGFGSEGDLFLFGTVL 550
           + + ++ G++ ++SKPV    R LP+       RGL+ T+ VD+  F     +FLFG VL
Sbjct: 536 MRQGQVRGLLSVKSKPV---ARRLPLKGPIAFGRGLEVTVEVDKDAFHGH-SVFLFGAVL 591

Query: 551 SHFFALYASINSFHELVVVNISNQEKYSWGTQSGMQPLI 589
           S + A +  +N F E V+      E   W    G + ++
Sbjct: 592 SRYLARHVEVNHFVETVLRVAGKGENMRWRPLCGTRQIL 630