Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., Protein ImpG/VasA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  220 bits (561), Expect = 1e-61
 Identities = 180/638 (28%), Positives = 293/638 (45%), Gaps = 76/638 (11%)

Query: 5   KYFREELAFLKEQGKEFTEIHPQLSRFLHGRTTD---PDVERLLEGFAFLTARLREKVED 61
           +Y+  EL++L+E G EF  +HP+++  L  + TD   P VER++E F+FL+AR + K++ 
Sbjct: 7   EYYNRELSYLRETGAEFATLHPKIAARLGMQGTDIADPYVERMIEAFSFLSARTQLKIDA 66

Query: 62  EFPELTHSIINMLWPNYLRPIPSMSVVAFEPDK---SVSEKQVIPRNTQLDSKPVFG--T 116
           EFP  T  ++ ++ PNY+ P PSM+VV   PD     +++   +PR+T   S    G  T
Sbjct: 67  EFPRFTQRLLEVVSPNYVTPTPSMAVVKLYPDTQEGDLAKGVTVPRDTAFVSPIPEGENT 126

Query: 117 ACHFNTCRDVALYPMQCQGVH---------------AEHTREATTIQISLRMLGDMT--- 158
           AC F + +DV L+P+  + V                  +   A  ++I+LR  G++T   
Sbjct: 127 ACQFRSSQDVTLWPLSIEEVRLTAAPPDMPALHRYLPPNIHVAGALRITLRTFGELTFSE 186

Query: 159 -VGDAKLDTVRFYLGGDKYSSQTLYLWLH------------HYLQKMTIEVQGVEFALPA 205
             G A+L    FYL G++  +  L+  LH            H+  ++ + +Q        
Sbjct: 187 LAGPARLP---FYLCGEERIASHLFELLHTSAVATLAGEPGHFDGELNVNLQ-------- 235

Query: 206 DAFSTVGFSSDQALLPYPKNVYDGYRILQEYLSFPEAFHFFDVKGFAKALPKAVSGDFTL 265
              +  G    Q LLP   NV+ G+ +L E+ + PE F+FF   G +  L K V G+   
Sbjct: 236 HPVAHEGLEPGQGLLPLAWNVFHGHNLLHEFFACPERFYFFTPTGLSAGLQK-VQGNVAE 294

Query: 266 RIHFSKTLPADTRVRQDN---FQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAH 322
            +     LP D  + Q +   F L+CTPVINLF      I++T   +E  +V     P  
Sbjct: 295 IVILLNRLPPDWLIHQTDAAQFSLFCTPVINLFPRTTTRIEVTHSVTEQHLVVDRTRPLD 354

Query: 323 YEIFSVDQVVGWQDTQSEGKRIR-------GEKRIYSSFESFQHEVERVRHRQALYYRTR 375
           YE+FSV +V G +   +     R        ++  +  + S + E  R     A  Y TR
Sbjct: 355 YEVFSVQEVEGLEAETTRKMIFRPLYHTRNNDEGNHGRYFSLRREPRR-SSENARRYGTR 413

Query: 376 VKESIRGDGFDSFISFVRGDETLSMGVDEAVSIKLTCTNRLLPLEL---GVGDICVATDS 432
              +    G + F+S V   E         +++    TNR LP  +   G  D+ V  D+
Sbjct: 414 TPYT----GSEVFLSLVDQHEAPYPENLRHITVTAMVTNRDLPCLIPRNGRDDLTV--DA 467

Query: 433 SPPFATFKNITVPSQSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVD 492
           + P A    I  P     P+ +  + W LI  LS NYL L   D  +      D   L  
Sbjct: 468 AIPVAGVGLIRPPRPPQPPLAEREMAWRLIRQLSFNYLPLADLDHRTGGQALRDLLNLFI 527

Query: 493 RQAERVARMRLDGIVKIESKPVDKILRGLPV----RGLQSTLYVDQAGFGSEGDLFLFGT 548
              +     ++  ++  ++ PV + L G  +    RG+   L VD+ GF      +LFG 
Sbjct: 528 PAHDSPQSRQVRSLIGCKTTPVTRRLPGSGLLVYGRGVSCELTVDEEGFSGISP-YLFGL 586

Query: 549 VLSHFFALYASINSFHELVVVNISNQEKYSWGTQSGMQ 586
           VL H+ A + SIN+F ++ + ++      +W  ++G +
Sbjct: 587 VLEHYIARHVSINTFSQMTLHSMQRGHVMTWPVRTGQR 624