Pairwise Alignments

Query, 589 a.a., type VI secretion system baseplate subunit TssF from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., type VI secretion system baseplate subunit TssF from Erwinia tracheiphila SCR3

 Score =  224 bits (572), Expect = 6e-63
 Identities = 187/630 (29%), Positives = 296/630 (46%), Gaps = 58/630 (9%)

Query: 6   YFREELAFLKEQGKEFTEIHPQLSRFLHGR---TTDPDVERLLEGFAFLTARLREKVEDE 62
           Y+  ELA+L+E G EF   +P+++  L  R     DP VERL+EGFAFLT+R++ K++ E
Sbjct: 8   YYNRELAYLREMGAEFAARYPKVAGRLGMRGIDVADPYVERLMEGFAFLTSRVQLKMDAE 67

Query: 63  FPELTHSIINMLWPNYLRPIPSMSVVAFEPDK---SVSEKQVIPRNTQLDSKPV--FGTA 117
           FP  +  ++ M+ PNYL P PS+++    PD     ++   ++PR T +DS+ +   G  
Sbjct: 68  FPRFSQRLLEMIAPNYLAPTPSLAIAELHPDSKKGDITGGFLVPRGTMMDSQTLKKSGVT 127

Query: 118 CHFNTCRDVALYPMQCQ-----GVHAE---------HTREATTIQISLRMLGDMTVGDAK 163
           C + T  DV L P++       GV A+              + ++I L    D+ +    
Sbjct: 128 CSYTTAHDVMLQPLRISHVELGGVPADIPLGPLGLSQRGAVSALRIRLECFNDVVLKHLS 187

Query: 164 LDTVRFYLGG-DKYSSQTLYLWLHHYLQK--MTIEVQGVEFALPADAFSTVGFSSDQALL 220
           LD + F+L G D    + L L + H +     T+E Q     L  DA    GF++DQA+L
Sbjct: 188 LDQLIFFLSGPDIQDQKLLELIMQHTVGSFCQTVEAQPQRRVLHDDAVKQEGFAADQAML 247

Query: 221 PYPKNVYDGYRILQEYLSFPEAFHFFDVK--GFAKALPKAVSGDFTLRIHFSKTLPADTR 278
           P     +DGYR+LQEY +FP  F F  +   G   A  K     F + +   K   +  R
Sbjct: 248 PDDLRNFDGYRLLQEYFAFPARFQFISISQPGGLVASCKPGVNAFEIVLLLDKADASLER 307

Query: 279 V-RQDNFQLYCTPVINLFEHDADPIDLTGRRSEYRIVPSSRYPAHYEIFSVDQVVGWQDT 337
           V  + +  L+CTPVINLF   A+   ++    EY +V  +  P  YEIFSV ++      
Sbjct: 308 VIDKSHLALHCTPVINLFPKTAERQKISDSVHEYHLVVDNIRPLDYEIFSVQKLYA-SGG 366

Query: 338 QSEGKRI--------RGEKRIYSSFESFQHEVERVRHRQALYYRTRVKESIRGDGFDSFI 389
           + +G+++         G++  Y ++ S + E +R     A  + TR        G + F+
Sbjct: 367 KGQGEQVFRPFWSTFSGDEGDYGAYFSLRRE-QRTLSEHAQRFGTRTGYI----GSEVFL 421

Query: 390 SFVRGDETLSMGVDEA--VSIKLTCTNRLLPLELGVGDI-CVATDSSPPFATFKNITVPS 446
           S V  DE  S   ++   ++ ++ CT+R LPL L   D        S P A       P+
Sbjct: 422 SLV--DERHSPWHNDLRHLTAEVMCTSRDLPLLLLQQDQGNFMMQDSIPVAQLTLRKGPT 479

Query: 447 QSLRPVLDGSLLWTLISNLSLNYLSLLSKDALSCVLRAYDFRALVDRQAERVARMRLDGI 506
                + +G   W L+S+L +NYLSL+  D             L    A+     ++DGI
Sbjct: 480 PPCTALAEGLTAWRLVSHLQMNYLSLMDGDDGQGASALRQLLGLYANLADAPVARQIDGI 539

Query: 507 VKIESKPVDKILRGLP-------VRGLQSTLYVDQAGFGSEGDLFLFGTVLSHFFALYAS 559
              + +PV    R +P        RG+   L VD+  F S    +L G+VL   F+   +
Sbjct: 540 RHCQLRPV---CRRVPEPGPIVFARGIGIELNVDEEAF-SGASPWLLGSVLERVFSRLVA 595

Query: 560 INSFHELVVVNISNQEKYSWGTQSGMQPLI 589
           +N+F E+ + +    E   W  + G + LI
Sbjct: 596 MNTFTEMTLTSQQRGEVGYWPARMGKRALI 625